Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g01008 ATGCTGAGCGTGCTGCGAGTGCACCTCCCTTCCGATATTCCCATTGTAGGATGTGAGCTCACGCCTTACGTGCTCCTCCGCCGCCCAGATAAGACCGTTACCACCGATGATGTTTCCGAGACCAATCCCTTAGATGGCCATTTCTTGCGTTACAAGTGGTATCGTGTACAAAGTGATAAAAAGGTTGCTGTTTGTAGCATACACCCATCAGAGCAAGCCACCCTGCAGTGTCTAGGTTGTGTCAAGGCCAAAATACCTGTTGCCAAGAGTTACCATTGCACATCAAAGTGTTTTTCAGATGCATGGCAACATCATCGTGTCTTACATGACCGTGCTGCAAGTGCAATCAATGAAAATGGAAATGAAGAGGAGGAGTTATTTGGGCGTTTTAATAATTCTGGCTCTGGGTCATCAAATACCAGCTTATCTGCCTCTGCATCAAGTGCTAGCTTGACAAATGGATCTGCACCATTGTATCCGGCAGCAGTTACACAACGAAGCGGTGGTGAAACGTGGTTTGAAGTTGGACGTTCTAAGACATACACCCCTACTGCCGATGACATTGGTCATGCTCCTTCACCTAGCCCACGACGAATGATACCTGTTGATCCGATGGGGCATTTAGATGCTGACGGACGTATAACATCTTCAGGATCTTTTACAGTTCTATCATATAACATATTATCTGATGCATATGCCTCAAGCGATCTTTACAATTATTGCCCTTCATGGGCTCTTTCGTGGCCATATCGCCGGCAAAATTTGTTACGAGAAATAGTTGGTTACCGTGCAGATATTATTTGTCTGCAGGAGGTTCAAAGTGACCATTATGAGGAATTTTTTTCCCCAGAACTGGATAAACATGGCTATTATGGTCTATACAAGAGAAAAACAAATGAGGTATACAATGATAGCAACAATAAAATTGATGGTTGTGCAACATTTTTTCGTAGAGACAGATTTTCACATGTGAAGAAATATGAGGTTGAATTTAATAAGGCTGCACAGTCATTAACAGATGCTATGATCCCCACCACCCAGAGGAAAACTGCCTTGAATAGGCTTGTTAAGGATAATGTTGCACTAATAGTTGTTCTAGAGGCAAAGGTTAACAATCAGCCTGTTGATAATCCAGGAAAAAGGCAGCTTCTATGTGTGGCAAATACTCATGTAAATGTGCAGCAAGATTTAAAGGATGTCAAGCTCTGGCAGGTGCATACATTGTTAAAAGGATTGGAGAAAATAGCTGCTAGTGCAGACATTCCAATGTTGGTTTGTGGAGACTTCAACTCAATTCCAGGAAGTGCTCCCCATGCACTTCTTGCAATGGGGAAGGTAGATCCTTCACATCCCGATTTAGCTGTTGACCCACTTAATATATTGCGCCCTCACAGCAAGTTGGTTCACCAGTTGCCACTGGTCAGTGCATATTCATCCTTTGCAAGAACAATGGGTCTTGGTTATGAACAGCATAAACGTAGACTTGACAGCACAACAAATGAACCTTTATTCACAAATGTCACGAGAGATTTTATTGGCTCTCTAGATTATATATTTTATACAGCGGATTCATTGGTTGTGGAGTCACTATTGGAGCTATTGGATGAGGAGAGTTTGAGGAAAGATACCGCACTTCCTTCTCCAGAATGGTCCTCGGATCATATAGCTCTCTTAGCTGAGTTCCGCTGCTGCAAGAATAGATCTAGGCGTTGA 1713 0.4302 MLSVLRVHLPSDIPIVGCELTPYVLLRRPDKTVTTDDVSETNPLDGHFLRYKWYRVQSDKKVAVCSIHPSEQATLQCLGCVKAKIPVAKSYHCTSKCFSDAWQHHRVLHDRAASAINENGNEEEELFGRFNNSGSGSSNTSLSASASSASLTNGSAPLYPAAVTQRSGGETWFEVGRSKTYTPTADDIGHVXPSPSPRRMIPVDPMGHLDADGRITSSGSFTVLSYNILSDAYASSDLYNYCPSWALSWPYRRQNLLREIVGYRADIICLQEVQSDHYEEFFSPELDKHGYYGLYKRKTNEVYNDSNNKIDGCATFFRRDRFSHVKKYEVEFNKAAQSLTDAMIPTTQRKTALNRLVKDNVALIVVLEAKVNNQPVDNPGKRQLLCVANTHVNVQQDLKDVKLWQVHTLLKGLEKIAASADIPMLVCGDFNSIPGSAPHALLAMGKVDPSHPDLAVDPLNILRPHSKLVHQLPLVSAYSSFARTMGLGYEQHKRRLDSTTNEPLFTNVTRDFIGSLDYIFYTADSLVVESLLELLDEESLRKDTALPSPEWSSDHIALLAEFRCCKNRSRR 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g01008 571 Pfam Endonuclease/Exonuclease/phosphatase family 224 555 IPR005135 GO:0003824
Arst6g01008 571 CDD Deadenylase_CCR4 223 564 - -
Arst6g01008 571 Gene3D Endonuclease/exonuclease/phosphatase 186 570 IPR036691 -
Arst6g01008 571 FunFam Carbon catabolite repressor protein 4 1 191 569 - -
Arst6g01008 571 SUPERFAMILY DNase I-like 217 565 IPR036691 -
Arst6g01008 571 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 161 564 - -
Arst6g01008 571 MobiDBLite consensus disorder prediction 184 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g01008 Arst-Chr6 9250366 9255861 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g01008 K12603 - gmx:100775270 1015.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g01008 6 9250366 9255861 Arst6g01008 6 9250366 9255861 ECH