Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g00909 ATGGCTGTAGTTGTAGTTGGAGTTGGTGTGCAGCAACAGTTTTTGTGTTCCTCTGAATCAAAGTGGAGCATTCCAACTACGCCATGCAATCCCCTTACCAGCTCCATCCTCATACGCCCATTCAAAAAGATTCAATTTTCAGTCATTTCATGCTCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCGAAGCTGAAACTCAAACTGCTGAATCTTGCGTCAATTTGGGTCTTCAGCTCTTCTCCAAAGGAAGGGTTAAGGATGCTTTAGCCCAGTTTGAAACAGCGCTTACCTTGAATCCCAATCCTGTGGAGGCCCAAGCTGCTTTCTACAACAAAGCTTGCTGCCACGCATACAGAGGGGAAGGAAAGAAAGCTGCCGATAGTCTCCGTATTGCTTTGAGGGAATACAACCTAAAATTTGGTACAATTCTCAATGATCCAGACTTGGCCTCTTTTAGAGCTTTGCCTGAGTTCAAAGAACTACAAGAAGAGGCCAGGATAGGTGGGGAAGATATTGGCAACAGTTTCCGGAGAGATCTAAAACTTATTAGTGAAGTTCAGGCACCATTTCGTGGGGTTAGGAGGTTTTTTTATGTGGCATTCACAGCAGCTGCAGGAATATCATTGTTCTTCACTCTACCCAGGCTAATCCGTGCAATTCAAGGTGGTGATGGTGCTCCTGATCTACTGGAAACTGCAGGGAATGCTGCCATTAACATTGGAGGCATTGTTGCTTTTGTGGCATTATTTTTTTGGGACAATAAAAAGGAGGAGGAGCAGATTGAACAAATATCTCGAGATGAGACACTATCAAGGCTGCCTTTGCGCTTAACAACTAATCGTGTAGTTGAACTTGTTCAGCTACGGGACACAGTTAGGCCGGTTATATTAGCTGGGAAAAAAGAAACAGTATCTTTGGCTTTGCAAAGAGCAGAACGATTTCGCACTGAGCTCGTTAGACGTGGTGTCCTGTTAGTTCCTGTCATATGGGGAGAAGGTAGGGAAACCAAAACAAAAACAAAAATTGAGAAGAAAGGTTTTGGTCGTCCACAAAAGGCTGCTGAAGCTCTTCCGTCCATTGGGGAAGATTTTGATAAGCGAACACAGTCCATAGCTTCAAAATCAAAGTTGAAAGCAGAAATCAGGTTCAAGGCTGAAGTTGTATCGCAAGCAGAATGGGAACAGTGGATAAGAGATCAGCAGAAATCTGAAGGAGTTACTGTTGGCGAAGACGTGTACATAATAATGCGCTTAGATGGGAGGATTCGAAGATCGGGGAAAGGAATGCCTGACTGGCAGCAAATTGTGAAGGAGCTACCAGAAATGGAAGCATTTTTGAGCAAGCTGGAAAGATGA 1356 0.4395 MAVVVVGVGVQQQFLCSSESKWSIPTTPCNPLTSSILIRPFKKIQFSVISCSSSSSSSSSSSEAETQTAESCVNLGLQLFSKGRVKDALAQFETALTLNPNPVEAQAAFYNKACCHAYRGEGKKAADSLRIALREYNLKFGTILNDPDLASFRALPEFKELQEEARIGGEDIGNSFRRDLKLISEVQAPFRGVRRFFYVAFTAAAGISLFFTLPRLIRAIQGGDGAPDLLETAGNAAINIGGIVAFVALFFWDNKKEEEQIEQISRDETLSRLPLRLTTNRVVELVQLRDTVRPVILAGKKETVSLALQRAERFRTELVRRGVLLVPVIWGEGRETKTKTKIEKKGFGRPQKAAEALPSIGEDFDKRTQSIASKSKLKAEIRFKAEVVSQAEWEQWIRDQQKSEGVTVGEDVYIIMRLDGRIRRSGKGMPDWQQIVKELPEMEAFLSKLER 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g00909 451 ProSiteProfiles TPR repeat profile. 69 102 IPR019734 GO:0005515
Arst6g00909 451 SUPERFAMILY TPR-like 66 135 IPR011990 GO:0005515
Arst6g00909 451 SMART tpr_5 69 102 IPR019734 GO:0005515
Arst6g00909 451 PANTHER PROTEIN LOW PSII ACCUMULATION 1, CHLOROPLASTIC 52 449 - -
Arst6g00909 451 Pfam Low psii accumulation1 / Rep27 177 254 IPR021883 -
Arst6g00909 451 Gene3D Tetratricopeptide repeat domain 51 155 IPR011990 GO:0005515
Arst6g00909 451 Pfam Tetratricopeptide repeat 69 101 IPR013105 -
Arst6g00909 451 FunFam Protein LOW PSII ACCUMULATION 1, chloroplastic 56 162 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g00909 - - gmx:100784188 700.279
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g00909 6 8186242 8189379 Arst6g00909 6 8186242 8189379 ECH