Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g00880 ATGCAATTTAAGCAGTGCCACATAAATTTTGCTATAGGACATATATGTTCTGCATATATTTATGATGATCAATGGTCGTGTCTTGATCTCAACATGTCCACCCCTCAACCTATAAGGAAACAAGTTTTCGATTGTCATCAAACGCAAGCGATAATGAAATCCTCAATTGCACTCGTATGTGTCCTTCTATACGCCACAGTTTCACTCGCATCCCAGCAAGAAGATCAGAAGCTAACAGCATACGATGTTCTAGAACAGTACGATTTTCCAGTGGGTCTTCTTCCCAAGGGTGCAACCGGGTATGAGCTTGACGCAAAGACGGGTCAGTTCACTGCTTATTTGAATGGAACTTGCAGCTTCAGCATTGAATCTTACGAGCTCAAGTACAAATCCACCATCAAGGGAGTGATCTCGAAAGGTAGGTTGGCGAAGCTGAAGGGTGTGAGTGTCAAGGTTGCACTCTTGTGGCTCAACATCGTTGAGGTCACTCGTAACGATGATGAACTCCAATTCTCCGTTGGTATTGCCTCCGCCGACTTTGCCGTCAACAACTTTCTCCAATGCCCCCAGTGTGGATGTGGATTCGATTGCAACAATTCCCGGGAAAACAACGGTTCTATCTCCTCATTTGAAGAGTTGGCGAGATCCTTCATCGACTACTTCGCAGCTTCGAGGATATATGTACACGGATCATATTACCTTGGCACCATCAGACAAGGACAACACGAAAGTTTAAAGGAATACATGACTCGGTTTGTTGAAGCAACCATGAAAATACTAGATCTAGACCCAGCAGTCCACTTGCACGCCTTCAAGGCCGGCCTCCGACCCGGTAAGTTCCGAGAGACAATCGCGGTTACTAAACCGAAGACGCTGGAGGAATTCTGA 888 0.4572 MQFKQCHINFAIGHICSAYIYDDQWSCLDLNMSTPQPIRKQVFDCHQTQAIMKSSIALVCVLLYATVSLASQQEDQKLTAYDVLEQYDFPVGLLPKGATGYELDAKTGQFTAYLNGTCSFSIESYELKYKSTIKGVISKGRLAKLKGVSVKVALLWLNIVEVTRNDDELQFSVGIASADFAVNNFLQCPQCGCGFDCNNSRENNGSISSFEELARSFIDYFAASRIYVHGSYYLGTIRQGQHESLKEYMTRFVEATMKILDLDPAVHLHAFKAGLRPGKFRETIAVTKPKTLEEF 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g00880 295 SUPERFAMILY At5g01610-like 54 197 IPR036758 -
Arst6g00880 295 Gene3D - 64 188 IPR036758 -
Arst6g00880 295 PANTHER T31J12.3 PROTEIN-RELATED 68 192 IPR007493 -
Arst6g00880 295 Pfam Retrotransposon gag protein 203 277 IPR005162 -
Arst6g00880 295 Pfam Protein of unknown function, DUF538 80 185 IPR007493 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g00880 Arst-Chr6 7984890 7988769 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g00880 - - ahf:112695788 598.971
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g00880 6 7984890 7988769 Arst6g00880 6 7984890 7988769 ECH
Arst6g00880 6 7984890 7988769 Arst6g00880 6 7984890 7988769 PCT