Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g00869 ATGTGTCACTTCACCTTCCTTGGTTGGTTGCTTCTTTCTCTCTCACTCAACATGCCTCTCTTCCTTCCTTCTTTTCCTTCTTTGTTTTTCCTTCTTTCTCTTCTCTCAACCACTCTTCTCTCTCACTCCTTCCCCTTCCCCAACCATGGCCACCGCCCTCACCCTCACCATTTCGCCTCTCACAACTACAGAGATGCTCTCAGCAAGTCCATCATCTTCTTTGAAGGCCAGAGGTCTGGCAAGCTCCCTTCTAACCAGAGGATAACTTGGAGGAGAGACTCTGCTCTCTCTGATGGTTCTGCCATGCATGTTGATTTGGTGGGAGGGTACTACGATGCAGGGGACAATGTGAAGTTCGGTTTTCCGATGGCATTCACGACCACCATGCTCTCATGGAGTGTTCTCGAGTTCGGTGGGGTCATGAAGGGCGAGTTGCAGAATGCCAGAGAGGCCATCCGCTGGGGAACTGATTACCTTCTCAAAGCCACTGCACATCCTGGCACCATTTATGTTCAGGTGGGAGACGCTAAGAAGGACCACGCGTGTTGGGAGAGGCCAGAAGACATGGATACTCCAAGAAATGTGTACAAGATAGACCATAATACCCCTGGTTCAGAAGTGGCCGCGGAAACCGCTGCGGCTCTTGCAGCTGCTTCTCTTGTTTTCAAGAAAACCGACCCCACCTACTCCAAAATTTTGGTTAGGAGGGCCATCTCTGTTTTCCAATTTGCTGATAAATACAGAGGATCATACAGCAATGGGTTGAAGCCATTTGTGTGCCCGTTCTACTGCTCTTACTCAGGCTATGAGGATGAGCTTCTTTGGGGTGCTGCTTGGTTGCACAAGGCTACTAGGAACTCCATCTATCTTAACTACATTAAGGTTAATGGACAAACACTTGGTGCTGCAGAATCTGACAATACATTTGGGTGGGATAACAAGCATGTTGGAGCAAGAATCCTTCTCTCTAAGGAATTTCTTGTTCAGAAAGTGCAAACCCTGCATGACTATAAGGGTCACGCGGACAATTTCATCTGTTCCCTCATTCCAGGAACCTCTTTCTCTTCGGCACAATACACACCAGGTGGGCTTCTATTCAAGATGAGTGATAGCAACATGCAGTATGTTACATCCACCTCCTTCCTTCTCTTAACATATGCCAAATACTTGACCAAATCCCACACCGTCGTCAACTGTGGCGGCACCACCGTTACTCCCAAGAGGCTCCGTGCAATAGCCAAAAAGCAGGTGGATTACTTGCTGGGAGACAATCCCTTGAAGATGTCGTACATGGTGGGATATGGTCCAAGGTACCCAAGAAGGATACACCACCGGGGATCATCTCTGCCGTCCATTTCTGTACACCCTGGCAAGATCCAATGCTCAGCAGGGTTCGGTGTCATGAACTCACAGTCCCCCAACCCCAACGTTCTTGTTGGTGCCGTGATTGGAGGGCCGGATCTGCATGATAGGTTCCCGGATGAACGGTCAGATTATGAGCAGTCAGAGCCAGCCACTTATATCAACGCACCTCTTGTGGGTACACTCGCTTATCTTGCACACTCATTTGGCCAACTCTGA 1581 0.4915 MCHFTFLGWLLLSLSLNMPLFLPSFPSLFFLLSLLSTTLLSHSFPFPNHGHRPHPHHFASHNYRDALSKSIIFFEGQRSGKLPSNQRITWRRDSALSDGSAMHVDLVGGYYDAGDNVKFGFPMAFTTTMLSWSVLEFGGVMKGELQNAREAIRWGTDYLLKATAHPGTIYVQVGDAKKDHACWERPEDMDTPRNVYKIDHNTPGSEVAAETAAALAAASLVFKKTDPTYSKILVRRAISVFQFADKYRGSYSNGLKPFVCPFYCSYSGYEDELLWGAAWLHKATRNSIYLNYIKVNGQTLGAAESDNTFGWDNKHVGARILLSKEFLVQKVQTLHDYKGHADNFICSLIPGTSFSSAQYTPGGLLFKMSDSNMQYVTSTSFLLLTYAKYLTKSHTVVNCGGTTVTPKRLRAIAKKQVDYLLGDNPLKMSYMVGYGPRYPRRIHHRGSSLPSISVHPGKIQCSAGFGVMNSQSPNPNVLVGAVIGGPDLHDRFPDERSDYEQSEPATYINAPLVGTLAYLAHSFGQL 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g00869 526 FunFam Endoglucanase 59 524 - -
Arst6g00869 526 PANTHER ENDO-1,4-BETA-GLUCANASE 50 521 - -
Arst6g00869 526 SUPERFAMILY Six-hairpin glycosidases 60 524 IPR008928 GO:0005975
Arst6g00869 526 Gene3D - 58 526 IPR012341 GO:0005975
Arst6g00869 526 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 3. 492 510 IPR033126 -
Arst6g00869 526 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 419 445 IPR018221 -
Arst6g00869 526 Pfam Glycosyl hydrolase family 9 63 516 IPR001701 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g00869 Arst-Chr6 7865421 7867563 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g00869 18 522 Glycoside Hydrolase AT1G02800 73.622 0.0 751
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g00869 K01179 - gmx:100789144 890.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g00869 6 7865421 7867563 Arst6g00869 6 7865421 7867563 ECH
Arst6g00869 6 7865421 7867563 Arst6g00869 6 7865421 7867563 PCT