Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g00868 ATGTCGAATCCACCTAAGCTCGGTCGAGTTCCCAGCATCAGAGACAGAGTTCAAGACACTCTCTCTGCTCACCGCAACGAACTTGTTTCTCTCCTCTCCAGGTATGTGGCTCAGGGGAAAGGGATTTTGCAACCTCATAGTTTGATCGATGAGCTTGAAAATATCCTTGGTGAGGATCAATCTACAGTGGAGCTTAAAAATGGTCCCTTTGGCGAAATCATAAAGTCTGCACAGGAAGCCATAGTTTTGCCTCCCTTTGTGGCCATAGCAGTTCGTCCAAGACCTGGTGTGTGGGAATATGTCCGTGTTAATATATTTGAACTCAGTGTGGAGCAATTGAGTGTTTCTGAATATCTCAGCTTCAAGGAAGAACTTGTAGATGGACAGATTAACGATAATTTTGTGCTGGAGCTAGATTTTGAACCATTTAATGCATCATTTCCACGCCCCACTCGTTCATCATCCATTGGCAATGGTGTCCAATTTCTCAATCGCCACCTTTCTTCAAGTATGTTTCGTAACAAAGATTCCTTGGAGCCCTTGCTTGAATTCCTACGTGTTCACAAGTATAAAGGCCATCCCCTGATGTTAAATGACCGTATACAAAGCATTTCCAAACTTCAATCTGCTCTGGCCAAGGCTGAGGAGTATCTTTCTAAGCTTGCACCTGAAACACTTTATTCCGAGTTTGAATATGTGTTACAAGGAATGGGTTTTGAGAGGGGTTGGGGTGACACTGCTGAACGTGTATTAGAGAACATGCATTTGCTATTGGATATTCTCCAGGCTCCTGATCCTTCTATACTAGAGACTTTTCTTGGGAGAGTGCCTATGGTGTTTAATGTTGTTATATTATCTCCTCATGGCTACTTTGGCCAAGCCAATGTCCTGGGTTTGCCTGACACTGGAGGACAGGTTGTTTATATACTAGATCAAGTTCGTGCCCTTGAGAATGAGATGCTCCTTCGGATCCAGAAGCAAGGACTTGATTTTACTCCTAGAATTTTGATTGTTACCAGGTTGATACCTGATGCAAAGGGTACAACATGCAACCAGCGGCTAGAAAGAGTCAGTGGTACTGAGTACACTCATATTTTGCGAGTTCCATTCAGATCTGATAAAGGAACCCTCAAGAAATGGATCTCGAGGTTTGATGTCTGGCCATATCTTGAGACTTATGCAGAGGATGTTGCCAGTGAAATTGCTGCTGAGTTGCAAGGTTATCCAGATTTCATCATTGGAAACTACAGTGATGGGAACCTTGTTGCATCTTTATTGGCTTATAAGATGGGAGTTACCCAGTGCACAATTGCGCATGCGCTGGAGAAGACAAAATATCCAGATTCAGATATATATTGGAAGAAATTTGAGGATAAATATCATTTTTCATGTCAGTTCACTGCTGACTTAATAGCTATGAATAATGCAGATTTTATCATCACTAGTACATACCAAGAGATTGCGGGAACGAAGAATACTGTTGGCCAGTATGAGAGCCACACTGCTTTTACTCTTCCTGGACTCTATAGGGTTGTCCATGGCATTGATGTGTTTGATCCCAAGTTCAATATTGTCTCTCCTGGAGCAGACATGTCGATCTATTTCCCCTACTCCGACAAGCAGAAAAGATTAACATCTCTGCATGGTTCCATTGAAAAGCTATTATTTGATCCTGAGCAGACTGATGAGCACATTGGCACGCTGAAAGACAAGTCAAAGCCTATAATATTCTCCATGGCAAGGCTAGACAGAGTAAAAAACATCTCTGGCTTGGTAGAAAGCTTTGCTAAGAACAACAAATTGAGGGAATTGGTGAACCTTGTGGTGGTTGCTGGTTATATTGATGTGAAAAAGTCCAGGGACAGAGAAGAAATATCAGAAATTGAGAAGATGCATGGTCTCATAAAAGAGTACAATCTCGATGGTGATTTTCGGTGGATTGCTGCCCAAACAAATAGAGCACGTAATGGTGAGCTGTATCGCTACATAGCGGACACAAAAGGTGTTTTCGTTCAGCCTGCTTTCTATGAAGCTTTTGGTCTTACAGTTGTGGAGGCCATGACTTGTGGCCTTCCCACATTTGCTACCTGCCATGGTGGTCCTGCTGAGATCATCGAACATGGTGTATCAGGATTCCATATTGATCCTTATCACCCTGACCAAGTTTCTGAGATTTTGCTTGGATTCTTCCAAAAATGCAATGAAGATCCAAGCCATTGGAATAAAATATCTGATGGTGGTCTTCAAAGAATTTATGAAAGGTACACATGGAAGATATATTCTGAAAGGCTTATGACCTTGGCTGGAGTTTATAGTTTCTGGAAACACGTCTCCAAATTAGAAAGGCGTGAAACCCGAAGATATCTTGAGATGTTCTATATTCTGAAGTTCCGCGATTTGGTAAATTCAGTTCCGCTAGCAAAGGATGATGATGCAAATTAG 2442 0.421 MSNPPKLGRVPSIRDRVQDTLSAHRNELVSLLSRYVAQGKGILQPHSLIDELENILGEDQSTVELKNGPFGEIIKSAQEAIVLPPFVAIAVRPRPGVWEYVRVNIFELSVEQLSVSEYLSFKEELVDGQINDNFVLELDFEPFNASFPRPTRSSSIGNGVQFLNRHLSSSMFRNKDSLEPLLEFLRVHKYKGHPLMLNDRIQSISKLQSALAKAEEYLSKLAPETLYSEFEYVLQGMGFERGWGDTAERVLENMHLLLDILQAPDPSILETFLGRVPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIQKQGLDFTPRILIVTRLIPDAKGTTCNQRLERVSGTEYTHILRVPFRSDKGTLKKWISRFDVWPYLETYAEDVASEIAAELQGYPDFIIGNYSDGNLVASLLAYKMGVTQCTIAHALEKTKYPDSDIYWKKFEDKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYSDKQKRLTSLHGSIEKLLFDPEQTDEHIGTLKDKSKPIIFSMARLDRVKNISGLVESFAKNNKLRELVNLVVVAGYIDVKKSRDREEISEIEKMHGLIKEYNLDGDFRWIAAQTNRARNGELYRYIADTKGVFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGVSGFHIDPYHPDQVSEILLGFFQKCNEDPSHWNKISDGGLQRIYERYTWKIYSERLMTLAGVYSFWKHVSKLERRETRRYLEMFYILKFRDLVNSVPLAKDDDAN 813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g00868 813 Gene3D - 149 278 - -
Arst6g00868 813 FunFam Sucrose synthase 149 278 - -
Arst6g00868 813 FunFam Sucrose synthase 12 148 - -
Arst6g00868 813 Gene3D - 26 148 - -
Arst6g00868 813 PANTHER - 9 809 IPR012820 GO:0005985|GO:0016157
Arst6g00868 813 PANTHER - 9 809 IPR012820 GO:0005985|GO:0016157
Arst6g00868 813 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 298 766 - -
Arst6g00868 813 Pfam Sucrose synthase 9 556 IPR000368 GO:0005985|GO:0016157
Arst6g00868 813 Pfam Glycosyl transferases group 1 562 740 IPR001296 GO:0016757
Arst6g00868 813 NCBIfam sucrose synthase 25 806 IPR012820 GO:0005985|GO:0016157
Arst6g00868 813 NCBIfam sucrose synthase 25 806 IPR012820 GO:0005985|GO:0016157
Arst6g00868 813 CDD GT4_sucrose_synthase 281 766 - -
Arst6g00868 813 Gene3D Glycogen Phosphorylase B; 530 757 - -
Arst6g00868 813 FunFam Sucrose synthase 3 395 521 - -
Arst6g00868 813 FunFam Sucrose synthase 530 757 - -
Arst6g00868 813 Gene3D Glycogen Phosphorylase B; 283 800 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g00868 Arst-Chr6 7859149 7864429 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g00868 1 810 Glycosyltransferase AT4G02280 83.333 0.0 1434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g00868 K00695 - gmx:100802045 1507.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g00868 6 7859149 7864429 Arst6g00868 6 7859149 7864429 ECH