Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g00861 ATGCAACTGTTCCTCAACTGCTTGCAGAGGTTTCTTGCAACTGCTTCTCAACAACACCGGAGGAACACACACATGAAAGGTCTAGTGGCTGTGCTTTTGCTTGTAGCATTGAGCACTGCACTGGAAAGCAATGGAGAAGAATATAGTCTTGGGCCATGTGAGCAGAAAGCAAGGAACAATGCTAGGCCTCACAGTGTTTCCATCTTGGAATTTGGGGCAGTTGGAGATGGGAAAACTTTGAATACAGTTGCATTTCAAAATGCTATATTCTATCTCAAGTCATTCACTGATAAGGGTGGTGCTCAACTATATGTTCCTTCTGGCAAATGGCTAACTGCAAGTTTAAACCTTATTAGCCACCTCACTCTCTTCCTTGAAAGAGGAGCTACCATCATTGCATCTCAGGAATATGATCATTGGGATGTTGTGGATTCTCTCCCATCTTATGGTCGGGGAATTAATGTTCCAAGTGGGAGATATCGCAGCTTGATTTATGGACAGAATTTGACTGATGTGGTGATTACAGGTGATAATGGAATTATTGATGGTCAGGGTTCTATCTGGTGGGAACTTTTCAAATCACATTCCTTAAATCACAGTCGACCGCATCTTGTAGAGTTTGTTGATTCTGTTGATGTCACAATTTCCAACTTGACATTTCTAAACTCTCCTGCATGGGACATTCATCCAGTATATTGCAGCAATGTCCAAATTCTGAACATAACAGCTACTGCACCTGCTGAATCTCCATACACAAGTGGTATAGTCCCAGATTCTTCTCAGAATGTTTGTATTGAAAGCAGCAACATTAGCACTGGTCATGATGCAATTGTGCTAAAGAGTGGATGGGATCGGTATGGTGTTGCCTTTGGAAAACCATCCTCAAATGTCCACATCAGGGGTGCTTACCTACAATCATCATCCGGCGCCGGCCTAGCATTCGGGAGTGAGATGTCCGGAGGTATATCTGATGTAACTGCAGAGCAGCTTCATATACTCAACTCCCGCATTGGCATTGAACTGAAGACAACTAAGGGAAGAGGTGGCTATATGAAAGGCATCCTAATTTCTGATGCAGATTTGGTAAATATTGATTTGGGTATCAGCATGAGTGGAAACACTGGTCTCCATCCAGATGAAGAGTATGATCCAAGTGCACTTCCTGTTGTTGATGGCATTACTTTTAAGAACATGATTGGTTCAAATATCACTGTTGCTGGAAACTTTTCAGGTTTAATTGATTCACCATTCACAACAATTTGTCTTTCAAACTTGAATTTCTCTGTCAGTTCTTCATGGTCTTGTTCTAATGTGATCGGTTTCTCCAGTGAGGTGTTTCCTGAGCCATGTCCTGAGCTTCATAACTCAGATTCAAAGTCTTCCTCTTGCTTTTCTTCTCTATACTCACCCTCTAGTTATATCTCGAGCTTATTCAATCAACATCCACAAGAATCATAG 1458 0.4184 MQLFLNCLQRFLATASQQHRRNTHMKGLVAVLLLVALSTALESNGEEYSLGPCEQKARNNARPHSVSILEFGAVGDGKTLNTVAFQNAIFYLKSFTDKGGAQLYVPSGKWLTASLNLISHLTLFLERGATIIASQEYDHWDVVDSLPSYGRGINVPSGRYRSLIYGQNLTDVVITGDNGIIDGQGSIWWELFKSHSLNHSRPHLVEFVDSVDVTISNLTFLNSPAWDIHPVYCSNVQILNITATAPAESPYTSGIVPDSSQNVCIESSNISTGHDAIVLKSGWDRYGVAFGKPSSNVHIRGAYLQSSSGAGLAFGSEMSGGISDVTAEQLHILNSRIGIELKTTKGRGGYMKGILISDADLVNIDLGISMSGNTGLHPDEEYDPSALPVVDGITFKNMIGSNITVAGNFSGLIDSPFTTICLSNLNFSVSSSWSCSNVIGFSSEVFPEPCPELHNSDSKSSSCFSSLYSPSSYISSLFNQHPQES 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g00861 485 SMART pbh1 233 259 IPR006626 -
Arst6g00861 485 SMART pbh1 260 281 IPR006626 -
Arst6g00861 485 SMART pbh1 294 316 IPR006626 -
Arst6g00861 485 SMART pbh1 385 407 IPR006626 -
Arst6g00861 485 SMART pbh1 351 372 IPR006626 -
Arst6g00861 485 SMART pbh1 322 343 IPR006626 -
Arst6g00861 485 SMART pbh1 210 230 IPR006626 -
Arst6g00861 485 Gene3D - 51 445 IPR012334 -
Arst6g00861 485 PANTHER PECTIN LYASE-RELATED 31 464 - -
Arst6g00861 485 SUPERFAMILY Pectin lyase-like 60 454 IPR011050 -
Arst6g00861 485 Pfam Glycosyl hydrolases family 28 161 438 IPR000743 GO:0004650|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g00861 Arst-Chr6 7769394 7772846 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g00861 25 465 Glycoside Hydrolase AT3G16850 58.916 0.0 535
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g00861 - - aip:107645668 860.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g00861 6 7769394 7772846 Arst6g00861 6 7769394 7772846 ECH
Arst6g00861 6 7769394 7772846 Arst6g00861 6 7769394 7772846 PCT