Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g00849 ATGGTGAAATCCCCTTCCTCTCCCTCTCCTGTGACGATAACGGTCTCTTCCGGAGGAAAAGAAAGCGGAAGCAGAAGCATAGGACTAACCAGTCCAGTTCCGCGCGCTTCCATCTCCAATAACCCTAATTCCCCCCTAAGGAGAGCTTCTGGTGGCGGCGGCAGTGTTGTAAGGAGGTTATCAGGCGGAGGAGCCAACAACTATTCCTCAATTTCAAATACTACAGAAGAATTCAACTCAGAGTATTACACATACACTGTTCAAATTCCTGCCACTCCTGAACGCCAGCCATTGACAACCTCACAGACAAGCCTTCCCGAATATGGCAATAACACCGGAAAACCCGAGACAAGCTACATCTCAGGAACAATCTTCACCGGAGGGTTCAACTCCGTGACCCGAGGGCATGTCATTGAGTGTTCCATGGAGCAAGAGGAGCCAACAAAGAAAACTAAATCCATGTGTGGAATGAAAGGCTGCGATGAGAAAGCGATTCAAGGAAGGTCCAGCGGTGGTCCTTGCGAGTGCGGGTTCAAGATATGCAGAGAGTGTTACTTGGAGTGTGTTGGAAATGGAGGAGGCAAGTGCCCTGGTTGCAAAGAGCCTTACAAGTATGTGAGTGATGATGAAGATGACGATGGCAAAGACTACGACGAAGACGATGACGAGCGTGTTTCTGAGGCTGAAGATCAGGCTTTGCCTTTGCCTTCCATGGCTGAGTTCAAGCTGGACAAGAGGCTCTCTGTTGTGAAATCATTTAAGGCGCAGAATCATCCGCCGGATTTCGATCACAACCGCTGGCTATTCGAAACGAAGGGAACTTATGGCTATGGAAATGCTGTGTGGCCTAAAGATGGACATGGAGCTGGTTCAGCTTCCGAAATCCGTCCGGATTTCGGAGAGAAAGCCAGAAGGCCCTTGACACGAAAGGTTGGAGTATCTGCTGCCATTCTCAGTCCATACAGGTTGCTTATTCTGTTTCGTCTTGTTGCACTTGGATTGTTTCTAACATGGAGGATTAGACACCCGAACCGCGAAGCAATGTGGCTGTGGGGAATGTCCATAACTTGTGAGCTATGGTTTGCATTCTCTTGGCTTCTTGATCAGCTCCCTAAGCTATGCCCTGTAAACAGAGTCACTGATCTCTCTGTCCTCAAAGAGCGCTTTGAGTCACCGAACCTTCGCAATCCTAAGGGGAGGTCTGATCTACCTGGAATTGACGTTTTTGTTTCCACGGCAGACCCTGAGAAGGAGCCTCCTCTTGTCACAGCAAACACTATTCTCTCCATCCTAGCCGTTGATTATCCGGTGGAAAAGATTGCTTGCTACCTGTCTGATGATGGTGGAGCTCTGTTGACATTTGAAGCTCTCGCGGAGACTGCTAGCTTTGCTAGAATTTGGGTTCCTTTCTGCAGAAAACACAGTATAGAGCCTAGAAATCCCGAAGCATATTTTGGGCAAAAGCGCGATTTTCTCAAGAACAAAGTTAGATTGGACTTTGTGAGGGAGAGGAGAAGAGTGAAAAGAGAGTATGATGAATTCAAAGTGAGAATAAACTCTTTGCCAGAGTCAATAAGGAGGAGATCAGATGCTTACAATGCTCATGAGGAGCTAAGAGCAAAGAAGAAACAATCCGAAGCCAGTATCCCTGCTTCAGAACCTATCAAGGTTCCTAAGGCAACATGGATGTCCGATGGTGCTTATTGGCCTGGAACTTGGGCTTCAGCAGAACCAGACCACTCCAGAGGGGATCATGAAGGCATAATCCAGGCAATGTTAGCTCCTCCAAATGCAGAAGAAGAATTTGGATCAGAAGCAGATGCAGAAAATTTGATTGACACAACAGGCGTAGACATTCGATTGCCAATGCTTGTGTATGTGTCAAGAGAGAAGAGGCCTGGATATGATCACAACAAGAAAGCGGGAGCGATGAACGCACTGGTTCGAACAAGCGCAATCATGTCGAATGGACCATTCATTCTGAATCTTGACTGTGATCACTACATCTACAACTCCCTGGCTCTCAGGGAAGGAATGTGTTTTATGCTCGACAGAGGAGGTGATAGGATATGCTATGTTCAATTCCCTCAAAGATTTGAAGGCATTGATCCGAGTGACCGATATGCGAACCACAACACAGTGTTCTTTGATGTGAGCATGAGAGCTCTTGATGGATTACAAGGACCAATGTATGTGGGAACTGGCTGCATATTTAGAAGAACAGCACTTTATGGTTTTAGTCCTCCAAGAGCTACAGAGCATCATGGATGGTTTGGAAGGAGGAAAATTAAGCTGTTTTTGAGAAAGCCAAAGAAGTCCAAGAAGGAAGACGATGAAGTTGCTGTGGCGATCAATGATGATGATGCTGATATTGAGACATTGCTTCTTCCAAAGAGATTTGGCAACTCTACTTCTCTGGCGGCATCCATCCCTGTTGCAGAATATCAGGGAAGGTTGCTTCAAGATTTGCAAGGAAAGGGAACACATGGAAGGCCAGCAGGCTCTCTCGCAGTGCCTCGCGAGCCCTTGGATGCTGCTACGGTTGCAGAGGCAATTAGTGTCATATCTTGCTTCTATGAGGACAAAACTGAATGGGGGAAGCGAGTTGGGTGGATATATGGTTCTGTTACAGAAGATGTAGTAACTGGTTACAGAATGCACAATAGAGGGTGGAGATCAGTGTATTGTGTCACCAAGAGGGATGCTTTTCGAGGAACAGCTCCGATCAACTTGACAGATAGGCTCCACCAAGTTCTCCGCTGGGCAACCGGATCGGTGGAGATCTTCTTCTCAAAGAACAATGCACTGCTGGCAAGTCCTAGAATGAAGTTCTTGCAAAGAGTGGCATACTTCAATGTTGGAATGTACCCTTTCACCTCAATGTTTCTGATTGTGTATTGCTTCCTGCCTGCAATTTCTCTCTTCACTGGAAAGTTCATAGTGCAATCCTTAAGTGCAACATTCTTAGTCTTCTTGCTTGGCATCACAATCACACTCTGCTTGCTTGCACTCCTTGAGATCAAGTGGTCAGGGATCACTCTTCACGACTGGTGGCGAAATGAGCAGTTCTGGTTGATCGGTGGAACCAGCGCCCACCCTGCCGCCGTGCTGCAAGGCTTGTTGAAGGTCATAGCCGGAGTGGACATATCATTCACCCTCACTTCAAAATCAGCCACCCCGGAGGACGGAGACGACGAATTCGCAGACCTTTACGTGGTGAAATGGAGCTTCCTAATGGTTCCTCCGATCACAATCATGATGGTGAACATGATTGCTATTGCTGTGGGAGTAGCCAGAACTATCTACAGTCCATTTCCACAATGGAGCAAGCTGGTTGGAGGTGTGTTCTTCAGTTTCTGGGTTCTCTGCCATCTCTTCCCCTTTGCAAAGGGACTCATGGGAAGAAGAGGGAAGGTTCCAACCATTGTTTATGTTTGGTCTGGATTACTCTCTATTATCATATCATTGCTTTGGGTGTACATAAGCCCACCTTCAGGAGCAGCACAAAATTACATGAATTTCCAGTTCCCTTAG 3534 0.4703 MVKSPSSPSPVTITVSSGGKESGSRSIGLTSPVPRASISNNPNSPLRRASGGGGSVVRRLSGGGANNYSSISNTTEEFNSEYYTYTVQIPATPERQPLTTSQTSLPEYGNNTGKPETSYISGTIFTGGFNSVTRGHVIECSMEQEEPTKKTKSMCGMKGCDEKAIQGRSSGGPCECGFKICRECYLECVGNGGGKCPGCKEPYKYVSDDEDDDGKDYDEDDDERVSEAEDQALPLPSMAEFKLDKRLSVVKSFKAQNHPPDFDHNRWLFETKGTYGYGNAVWPKDGHGAGSASEIRPDFGEKARRPLTRKVGVSAAILSPYRLLILFRLVALGLFLTWRIRHPNREAMWLWGMSITCELWFAFSWLLDQLPKLCPVNRVTDLSVLKERFESPNLRNPKGRSDLPGIDVFVSTADPEKEPPLVTANTILSILAVDYPVEKIACYLSDDGGALLTFEALAETASFARIWVPFCRKHSIEPRNPEAYFGQKRDFLKNKVRLDFVRERRRVKREYDEFKVRINSLPESIRRRSDAYNAHEELRAKKKQSEASIPASEPIKVPKATWMSDGAYWPGTWASAEPDHSRGDHEGIIQAMLAPPNAEEEFGSEADAENLIDTTGVDIRLPMLVYVSREKRPGYDHNKKAGAMNALVRTSAIMSNGPFILNLDCDHYIYNSLALREGMCFMLDRGGDRICYVQFPQRFEGIDPSDRYANHNTVFFDVSMRALDGLQGPMYVGTGCIFRRTALYGFSPPRATEHHGWFGRRKIKLFLRKPKKSKKEDDEVAVAINDDDADIETLLLPKRFGNSTSLAASIPVAEYQGRLLQDLQGKGTHGRPAGSLAVPREPLDAATVAEAISVISCFYEDKTEWGKRVGWIYGSVTEDVVTGYRMHNRGWRSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSKNNALLASPRMKFLQRVAYFNVGMYPFTSMFLIVYCFLPAISLFTGKFIVQSLSATFLVFLLGITITLCLLALLEIKWSGITLHDWWRNEQFWLIGGTSAHPAAVLQGLLKVIAGVDISFTLTSKSATPEDGDDEFADLYVVKWSFLMVPPITIMMVNMIAIAVGVARTIYSPFPQWSKLVGGVFFSFWVLCHLFPFAKGLMGRRGKVPTIVYVWSGLLSIIISLLWVYISPPSGAAQNYMNFQFP 1177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g00849 1177 SUPERFAMILY RING/U-box 160 205 - -
Arst6g00849 1177 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 608 760 IPR029044 -
Arst6g00849 1177 MobiDBLite consensus disorder prediction 207 231 - -
Arst6g00849 1177 Pfam RING/Ubox like zinc-binding domain 158 204 - -
Arst6g00849 1177 FunFam cellulose synthase-like protein D3 611 748 - -
Arst6g00849 1177 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 139 227 IPR013083 -
Arst6g00849 1177 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 305 1147 - -
Arst6g00849 1177 MobiDBLite consensus disorder prediction 93 113 - -
Arst6g00849 1177 MobiDBLite consensus disorder prediction 1 48 - -
Arst6g00849 1177 SUPERFAMILY Nucleotide-diphospho-sugar transferases 421 971 IPR029044 -
Arst6g00849 1177 MobiDBLite consensus disorder prediction 211 227 - -
Arst6g00849 1177 Pfam Cellulose synthase 406 1168 IPR005150 GO:0016020|GO:0016760|GO:0030244
Arst6g00849 1177 Pfam Cellulose synthase 406 1168 IPR005150 GO:0016020|GO:0016760|GO:0030244
Arst6g00849 1177 MobiDBLite consensus disorder prediction 1 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g00849 Arst-Chr6 7690639 7695087 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g00849 55 1177 Glycosyltransferase AT3G03050 66.170 0.0 1533
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g00849 K00770 - gmx:100804687 2015.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g00849 6 7690639 7695087 Arst6g00849 6 7690639 7695087 ECH