Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g00828 ATGCGTCGCAACACCAACGGTCGATCGCCGCTGGTGAATCAACAGCGCCAAATCACTGCTTTCTTCTCCAAATCCACTTCTTCTTCTCCTTCTCCTTCTCCCATTCTCTCCGATTCCAAATCCATCAGCAACAATAAAACCTCTAAGCTAAACCCTAACCCTAGCCCTACCCCTCCCACGCCTTCCCCTTCTAATCCCAAACCCATTCTTCTCGTCGGAGCTTCTTCTCCTCTATACTCCGATGACGTCATTGGAAAAAGGATCAAGGTTTATTGGCCTCTTGATAAAGCATGGTACGAAGGTACCGTCAAATCGTTCGATAATGCCACTTCTAAGCATTTAGTGTTATACGACGATGACGAAGAGGAATCGCTCGACCTTTCCAAGGAGAAGTTCGAATGGGTTCAGGATTCTTCATCGTCTGTCAAGAAGCTTAAACGGTTGCGTCGCAGCTGCGACATCCCCATTGTTAGGAAGATGGTGATTGACGACGACGAGAGTGATGGAAGTCCCAAAGGTGTTGATGATGGTAATTGTGGCAGTGATGATTCGGATGAAGATTGGGGGAAGAATGCGGTGGATGAAGGCGCCGAGGAGGAAGATGACGTGGAGCTAGACAACGAGGAAGATGACTATGAAGATGCTGCTGCAGAGAGGTCTAAAAGAAAGTCAAGTGCGAAGGTGGAGCCCAAGAAGCGGAAAATGAGTGGAACAGAGAAACCGGAGCCTGCAAAAAAGAGCAAGAACGTCGAGGAAGCTGGTGGTGTTAAGGGAGCTTTCAAGTTCTCAGTATTGGAGCCTTCAAGTACTTCGGATACTAAAAAGATATCCAATGGCGTTGACAATGTGGCAATTGATGATGCCTCTGAAAGATTTGCGACAAGGGATGCTCAGAAATTTCGCTTTCTCAGAGAAGACCGCAGGGATGCTAAACGAAGGCGTCCTACTGATGAAAATTATGATCCAAGAACTCTCTATTTGCCTCCTGATTTCTTAAGGAGTTTGTCAGATGGCCAGAAACAATGGTGGGAGTTCAAGTCAAAGCATATGGACAAAGTTTTATTTTTCAAGATGGGTAAATTTTATGAACTTTTTGAGATGGATGCACATGTAGGAGTGAAAGAGCTTGACTTGCAGTATATGAAGGGGGAACAACCTCATTGTGGTTTTCCGGAGAGGAATTTCTCAATGAATGTGGAGAAACTTTTTCAGGGTTACCGAGTTCTTGTTATAGAGCAGACTGAAACACCTGTACAGTTAGAGCTTCGTCGCAAGAATGGCTCAAAAGATAAGGTTGTGAGACGGGAAATATGTGCAGTGGTTACAAAAGGCACACTAACTGATGGGGAGTTGCTGTCAGCAAACCCAGAAGCTGCGTATTTGATGGCACTGACAGAGCAACATGAAAACAACGCAAATGAAGTTTCAGAGCGCATTTATGGACTTTGTATAGTCGATGTTGCCACAAGCAGAATCATTCTTGGACAGTTTAAGGATGACTTGGAATGCAGTGCTTTATGCTGCATCTTGTCTGAGATTAGGCCAGTTGAAATTGTGAAACCTGCTGAAGTGCTCAGTGCTGAAACAGAGAGAGTACTGCTGAAGCATACTAGAAATCCTCTAGTGAATGAATTAGTTCCTAATGTGGAGTTTTGGGATGCTGAAAAAACCGTGGATCAATTGAAGAGAATTTACAGGCACACTGATGAAGTTAGTCTAGAAGATAATGAGCTAGGTTGCTTGCCAGATGTTTTGCTGGAGCTGGTGAAAACTGTCAATGACAATAAAAGTGCACTTTCAGCTCTTGGGGGTGCTCTATATTATCTGAAACAGGCTTTCTTAGATGAGGCATTGCTTAGATTTGCACACTTTGAGTTACTTCCATGTTCTGGCTTCTGTGATCTTGCCTCAAAACCATACATGGTTCTTGATGCAGCAGCCTTGGAGAATCTTGAAATTTTTGAGAATAGCAGAAATGGAGATTCTTCAGGTACTCTGTATTCCCAATTAAACCATTGTGTTACCGCATTTGGAAAGAGACTACTAAGGGCATGGCTTGCAAGACCATTATGTCATATAGAGTTAATTAAGGAGCGCCAGGAAGCCATTACTAGTTTAAAGGGAGTTAATTTACCTTATGCACTAGAATTTCGAAAAGCTTTGTCAAGGTTACCTGACATGGAGCGATTGCTGGCCCGCATCTTCTCCACTAGTGAAGCTAATGGAAGGAATGCTAATAAAGTGGTTCTGTATGAGGATGCAGCAAAGAAACAACTACAAGAGTTTATTTCTGCTCTTCGTGGTTGTGAACTAATGTTGCAAGCATGCTCTTCTCTTGGCGTTATTCTGAATGATGTCAAATCTAGACTACTCCATCATCTGTTAACACCTGGAAAAGTTCTTCCTGATGTCTGCTTGGCTCTGAACCATTTCAAGGATGCCTTTGATTGGGTGGAAGCCAATAATTCAGGCCGTGTAATACCTCATGAAGGAGTTGACCCTGAGTATGACTCAGCCTGTAAGGCAGTTAAAGAAATTGAGTCGAGTTTATCAAAACATCTTATTGAACAAAGGAAATTGCTTGGAGACACATCTATCACTTATGTCACTGTTGGAAAGGACACATACCTTTTAGAAGTCCCAGAAAATTTTCGTGGGAAAGTTCCTCGGGACTATGAGCTGCGTTCATCTAAAAAAGGCTTCTTTAGGTACTGGACTCCTGCTATTAAAAAGTTCCTGGGAGAACTCTCCCAAGCTGAATCTGAAAAGGAGTCCTTATTGAAAAGTACATTGCAGAGATTAATTGGACGCTTTTGTGAAAATCATACTAAGTGGAGGCAATTGGTGTCTACTACAGCTGAGCTGGATGTTTTGATCAGTTTAGCTATTGCTCGTGATTACTATGAAGGGCCAACATGCAGACCAAGTTTTTTAAGCATGCTATCTACCAAAGACAGTCCTTACCTCTCTGCTAAAAGTTTGGGACACCCAGTCCTTAGGAGTGATTCCTTAGGAAAGGGGGCCTTTGTACCCAATGACATATCAATTGGTGGTCAACACGATGCCAACTTTATTCTTCTAACTGGTCCTAACATGGGTGGAAAGTCAACTCTCCTTCGCCAAGTTTGCTTGGCGGTGGTTTTGGCCCAGGTAGGGGCTGATGTCCCAGCAGAGAGTTTTGATTTGTCACCTGTGGACCGTATCTTTGTTCGCATGGGTGCCAAAGATAATATCATGGCTGGCCAGAGTACATTTTTAACTGAGCTTTCAGAAACTGCAACAATGCTGTCTTCAGCCACTCGTAATTCATTGGTGGCTCTTGATGAGCTTGGGCGTGGGACCTCAACTTCTGATGGGCAAGCCATTGCGGAATCTGTTCTAGAACATTTTGTGCGGAAGGTTCAGTGTCGTGGATTGTTTTCTACACATTATCATCGATTAGCTATCGATTATTACAAAGATCCCAAGGTCTCCCTCTGCCATATGGCATGCCAAGTTGGTAGTGGAACAATTGGCGTGGATGAAGTCACCTTTCTTTATAGGCTGACCCCTGGTGCATGTCCCAAGAGCTATGGTGTTAATGTTGCACGGTTGGCAGGGCTTCCAACTTCCGTGCTTCAGAAGGCTGCTGCTAAGTCCAAAGAATTTGAGGCCTCTTATGGTAAATCTAGAAATGCGTCTCTTGAAACAAACTCTCCAAATCAGGAATGGGTTGATGAGATGATAGTTGTAATGAAAATGTTGAACAAGGCTGCTGCAAATTTGAGTTATCAGGAAGGTGGTTGTGACAGCTCCCTCCATGAACTTAAGAGTAGAGCAAGAGAACTTATGCAGCGATGTTAA 3843 0.4361 MRRNTNGRSPLVNQQRQITAFFSKSTSSSPSPSPILSDSKSISNNKTSKLNPNPSPTPPTPSPSNPKPILLVGASSPLYSDDVIGKRIKVYWPLDKAWYEGTVKSFDNATSKHLVLYDDDEEESLDLSKEKFEWVQDSSSSVKKLKRLRRSCDIPIVRKMVIDDDESDGSPKGVDDGNCGSDDSDEDWGKNAVDEGAEEEDDVELDNEEDDYEDAAAERSKRKSSAKVEPKKRKMSGTEKPEPAKKSKNVEEAGGVKGAFKFSVLEPSSTSDTKKISNGVDNVAIDDASERFATRDAQKFRFLREDRRDAKRRRPTDENYDPRTLYLPPDFLRSLSDGQKQWWEFKSKHMDKVLFFKMGKFYELFEMDAHVGVKELDLQYMKGEQPHCGFPERNFSMNVEKLFQGYRVLVIEQTETPVQLELRRKNGSKDKVVRREICAVVTKGTLTDGELLSANPEAAYLMALTEQHENNANEVSERIYGLCIVDVATSRIILGQFKDDLECSALCCILSEIRPVEIVKPAEVLSAETERVLLKHTRNPLVNELVPNVEFWDAEKTVDQLKRIYRHTDEVSLEDNELGCLPDVLLELVKTVNDNKSALSALGGALYYLKQAFLDEALLRFAHFELLPCSGFCDLASKPYMVLDAAALENLEIFENSRNGDSSGTLYSQLNHCVTAFGKRLLRAWLARPLCHIELIKERQEAITSLKGVNLPYALEFRKALSRLPDMERLLARIFSTSEANGRNANKVVLYEDAAKKQLQEFISALRGCELMLQACSSLGVILNDVKSRLLHHLLTPGKVLPDVCLALNHFKDAFDWVEANNSGRVIPHEGVDPEYDSACKAVKEIESSLSKHLIEQRKLLGDTSITYVTVGKDTYLLEVPENFRGKVPRDYELRSSKKGFFRYWTPAIKKFLGELSQAESEKESLLKSTLQRLIGRFCENHTKWRQLVSTTAELDVLISLAIARDYYEGPTCRPSFLSMLSTKDSPYLSAKSLGHPVLRSDSLGKGAFVPNDISIGGQHDANFILLTGPNMGGKSTLLRQVCLAVVLAQVGADVPAESFDLSPVDRIFVRMGAKDNIMAGQSTFLTELSETATMLSSATRNSLVALDELGRGTSTSDGQAIAESVLEHFVRKVQCRGLFSTHYHRLAIDYYKDPKVSLCHMACQVGSGTIGVDEVTFLYRLTPGACPKSYGVNVARLAGLPTSVLQKAAAKSKEFEASYGKSRNASLETNSPNQEWVDEMIVVMKMLNKAAANLSYQEGGCDSSLHELKSRARELMQRC 1280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g00828 1280 Gene3D MutS, connector domain 458 638 IPR036678 GO:0005524|GO:0006298|GO:0030983
Arst6g00828 1280 Pfam MutS domain III 647 962 IPR007696 GO:0005524|GO:0006298|GO:0030983
Arst6g00828 1280 Pfam MutS domain V 1026 1216 IPR000432 GO:0005524|GO:0006298|GO:0030983
Arst6g00828 1280 PANTHER DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBER 339 1230 IPR045076 GO:0005524|GO:0006298|GO:0030983|GO:0140664
Arst6g00828 1280 SUPERFAMILY DNA repair protein MutS, domain II 455 656 IPR036678 GO:0005524|GO:0006298|GO:0030983
Arst6g00828 1280 Pfam MutS domain II 460 612 IPR007860 GO:0005524|GO:0006298|GO:0030983
Arst6g00828 1280 Gene3D DNA repair protein MutS, domain I 294 453 IPR016151 GO:0005524|GO:0006298|GO:0030983
Arst6g00828 1280 Gene3D - 641 962 - -
Arst6g00828 1280 SUPERFAMILY Tudor/PWWP/MBT 82 123 - -
Arst6g00828 1280 SMART DNAend 661 1002 IPR007696 GO:0005524|GO:0006298|GO:0030983
Arst6g00828 1280 MobiDBLite consensus disorder prediction 214 252 - -
Arst6g00828 1280 MobiDBLite consensus disorder prediction 1 72 - -
Arst6g00828 1280 Gene3D - 973 1250 IPR027417 -
Arst6g00828 1280 FunFam DNA mismatch repair protein 973 1246 - -
Arst6g00828 1280 PIRSF Msh6 1 1269 IPR017261 GO:0006298|GO:0030983
Arst6g00828 1280 Pfam MutS domain I 339 449 IPR007695 GO:0005524|GO:0006298|GO:0030983
Arst6g00828 1280 PIRSF Msh6 1 1269 IPR017261 GO:0006298|GO:0030983
Arst6g00828 1280 Pfam MutS family domain IV 831 922 IPR007861 GO:0005524|GO:0006298|GO:0030983
Arst6g00828 1280 Gene3D - 807 938 - -
Arst6g00828 1280 MobiDBLite consensus disorder prediction 159 252 - -
Arst6g00828 1280 FunFam DNA mismatch repair protein 293 454 - -
Arst6g00828 1280 MobiDBLite consensus disorder prediction 1 51 - -
Arst6g00828 1280 FunFam DNA mismatch repair protein 807 938 - -
Arst6g00828 1280 CDD Tudor_Agenet_AtEML-like 84 134 - -
Arst6g00828 1280 SMART TUDOR_7 80 138 IPR002999 -
Arst6g00828 1280 SUPERFAMILY DNA repair protein MutS, domain I 324 445 IPR016151 GO:0005524|GO:0006298|GO:0030983
Arst6g00828 1280 MobiDBLite consensus disorder prediction 192 213 - -
Arst6g00828 1280 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 984 1217 IPR027417 -
Arst6g00828 1280 Coils Coil 909 929 - -
Arst6g00828 1280 MobiDBLite consensus disorder prediction 52 66 - -
Arst6g00828 1280 SUPERFAMILY DNA repair protein MutS, domain III 644 963 IPR036187 -
Arst6g00828 1280 Gene3D - 81 131 - -
Arst6g00828 1280 SMART mutATP5 1022 1214 IPR000432 GO:0005524|GO:0006298|GO:0030983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g00828 Arst-Chr6 7411651 7419318 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g00828 K08737 - gmx:100811104 1875.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g00828 6 7411651 7419318 Arst6g00828 6 7411651 7419318 ECH