LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Arst6g00804	ATGTCGATCAGATTCGCCCTATGCTTATCGCTCTTCATCGCACTTCATTCTATTTCAGCTGCTTCTGCTGATTCCATCTATGGCTGCGGCGGCTTCGTCGAGGCGAGCTCATCGCTGGTGAAATCGAGGAGGCAAAGTGATTCCAAATTGGATTATTCTCATGTCACGGTTGAGCTTCAAACAGTGGATGGACTGGTAAAGGATAGAACACAGTGTGCTCCAAATGGATACTACTTTATTCCAGTTTATGACAAGGGTTCCTTTGTAATTAAAATTAATGGACCTGAAGGATGGGCATGGGATCCAGAGAAGGTTCCAGTGGTGGTTGACGATAAAGGTTGTAATGGCAATGAAGATATCAATTTTCATTTCACAGGGTTTACTATATCTGGTAGAGTTGTTGGAGCTGTAGGTGGAGGAAGCTGTTCAGTTAAAAATGGTGGTCCTTCAAATGTAAAAGTTGAGCTATTGTCCCCTGCTGGGGATGTTGTCTCTGCTGTCTTAACTTCTCCATCAGGGAATTACTTGTTTAAAAATATAATTCCAGGAAAATATGAACTACGAGCTTCAAGTCCTAATATGAAAGTTGAAGTTAAAGGTTCAACCCAGGTGGAGTTGGGCTTTGGAAATGGTGTAGTTGATGATGTGTTCTTTGTCCCTGGGTATAGTATCAGTGGTTTTGTTGTTGCTCAGGGAAATCCAATATTAGGGGTACATGTTTTCCTATATTCAGATGATGTTTCTGAGGTAGAATGTTTACAAGGTTCTCCAAATGGTCCACGAGAAGGGGTAGCTCTCTGTCATGCTATGTCCGATGCTGATGGAAAGTTCACATTCAATTCTGTACCTTGTGGAAGTTATGAACTCGTACCTTACTATAAGGGTGAAAATACAGTATTTGATGTTTCACCGTCCAGCGTCTCGGTTAATGTTAAGCATCAACATGTAACGGTGCCTCAGAAATTCCAGGTAACTGGGTTTTCTCTTGGAGGCCGTGTGGTTGATGGAAATGAAATGGGAGTGGAGGGTGTTAAAATTATAGTGGATGGTCATGACAGGTCTATTACGGATAATCAAGGATATTATAAGCTTGATCAGGTGACATCCAAGCATTATAGCATTGAAGCCAAAAAGGAGCATTACAAATTCAGGAAGTTGGAGAATTATATGGTTTTGCCAAATATGGCTTCAATAGAAGACATTAATGCCATTTCATATGACCTTTGTGGCTCAGTTAGGTCAGTTAGTGGTGGTCCGAAAGCCAAGGTGGCTTTGACTCATGGACCTGAGAATGTGAAACCACAAAAGAAGCAAACAGATGGAAATGGAAGATTCTGCTTTGAGGTTGTGCCTGGTGAATATCGGTTATCAGCTATTGCTGAGAATGCTCCTGGGCTCATGTTTATGCCGTCATATATTGATGTTGTGGTCAAAAGTCCATTGTTAAATGTAGAATTTTCACAGGCTCTGGTCAATATTCGCGGTGCTGTATCCTGCAAGGAGAAATGTGGTCCATCTGTATCTGTTACTCTTGTCAAGGTTGACAAACATAATGAAGATAGAAAGACAATTAAATTGACCACCGAGAGTAGTGAATTTCTGTTTTCAGATGTTATTCCTGGAAAGTATAGACTTGAGGTCAAACATAGTTCCCCTGAAGCAGTGACTTCAAAGGATGATTGGTGCTGGGAGCAGAGCTTCATTGATGTAAATCTTGGAGCTGAGGACTTGGAAGGAATTACATTTGTTCAGAAAGGCTACTGGGTCAATATTATCTCAACTCATAATGTTGATGGTTACTTGACTCAACCCGATGGGTCAAATGTGAATTTGAAGATCAAGAAAGGTTCCCAGAAAATATGTGTAGAATATCCAGGAGTACATGAATTTAAATATGTAGACTCGTGTGTCTTCTTTGGGAGCTCATCTGTGAAAATTGATACATCTGTTCTGTCGCCTGTCCATCTAAAAGGAGAGAAGTATCTTCTTAAAGGACAAATAAATGTGCAGCCCAGCTCACTTGATTCATTACCCAAGAGCATAGTTGTGGACATTAAAAATGGTGGAGCTGGTGGTGTTGATTCTGCTACAGCCAAACTTAAATCCCATGAAAAAGATCAAACAAATACTGCTATCTACGAGTACTCTTTTTGGGCCAATCTTGGAGAAAAGCTTACCTTTATTCCTCGGGACTCAAGGAATGATGGGGAGAAAAAACTTCTGTTTTACCCTAGAGAGCATCATATATCAGTGGCAGATGATAATTGTCAAACTTATATTCCTACGTTTTCTTCTCGACCGGGAGTATATATTGAAGGATCAGTTTCTCCTCCTCTTTCTGGAGTCCATATCAAGCTTGTTGCAGCTGGAGAGAGTAGCATTACTGCACTTAAAAGTGGTGAAATAGTACTTGAAACATCAACTGGGGCTGATGGCACCTTTGTGGCAGGTCCTCTGTATGATGATGTTGGTTACAATGTTGAAGCCTCAAAGCCTGGCTATCATTTAAAACAAGTTGGACCTTATTCCTTTAGTTGTCAGAAGCTTAGTCAAATTTCAGTGCTTATACATCACAAGGATGATGTTAGAGAACCCATTCCTTCTGTTCTGCTATCTTTGAGTGGTGACAATGGTTATAGAAACAACTCGGTATCTGGTGATGGAGGGTCATTCCTGTTTGATAATTTGTTTCCTGGAACATTCTATTTGCGTCCTGTTTTGAAGGAGTATGCTTTCTCACCTTCAGCACAGGCAATAGAGCTTGGAGGAGGGGAATTTAAAGAAGTTGTTTTTCAGGCGACTCGTGTAGCATACAGTGCTACTGGCTTCGTCACACTGTTGTCTGGCCAGCCCAAAGGAGGAGTGTCAGTTGAAGCTCGGGCAGAGTCAAAAGGTTATTTCGAGGAAGCTGTGACAGATTCTTCTGGGAATTACCGTCTCAGAGGACTACTGCCTGATACAGTCTATGCTGTTAAAGTAGCTAAAAGGGATGTTCTAGGCAGTTCAAACATAGAGCGTGCTTCTCCTGATTCTATTCCTGTCAAGGTTGGAACTGAGGATATCAGGGGTTTAGATTTCGTAGTTTTTGAGGAGCCAGAAATTACAATTGTTAGTTGCCATGTTGAAGGAAATGGTACTAAGGAACTGCATAAACACCTGATGGTAGAAATTAAGTCAGCTAGTGACCCAAATAAGATAGAGTCTGTCTTCCCCCTACCAATTTCTAACTACTTTCAAGTGAAGGGTTTATCTAAAGGCAGACACCTTCTGCAACTCCGGTCTGGCCTCCCTTCGAGTTCCCTTAAATTTGAATCCGACATCATTGAGGTAGATTTGGAGAAAGATACTCAAATCCATGTAGGCCCACTGAGATACAAGATCGACGATCAGATGAAGCAGGAGCTGACGCCCGCACCAGTATTCCCTCTTATAGCTGGATTATTTTTCATTGCACTATTCCTCAGCATTCCAAGATTGAAGGATCTGTATCAAGCAACTGTAGATATACCCACACCAGGACTCGCTGCTACTTCAAGAAAGGACACAAGGAAGACAACGATGCGGAAGAAGACATATTAG	3579	0.4155	MSIRFALCLSLFIALHSISAASADSIYGCGGFVEASSSLVKSRRQSDSKLDYSHVTVELQTVDGLVKDRTQCAPNGYYFIPVYDKGSFVIKINGPEGWAWDPEKVPVVVDDKGCNGNEDINFHFTGFTISGRVVGAVGGGSCSVKNGGPSNVKVELLSPAGDVVSAVLTSPSGNYLFKNIIPGKYELRASSPNMKVEVKGSTQVELGFGNGVVDDVFFVPGYSISGFVVAQGNPILGVHVFLYSDDVSEVECLQGSPNGPREGVALCHAMSDADGKFTFNSVPCGSYELVPYYKGENTVFDVSPSSVSVNVKHQHVTVPQKFQVTGFSLGGRVVDGNEMGVEGVKIIVDGHDRSITDNQGYYKLDQVTSKHYSIEAKKEHYKFRKLENYMVLPNMASIEDINAISYDLCGSVRSVSGGPKAKVALTHGPENVKPQKKQTDGNGRFCFEVVPGEYRLSAIAENAPGLMFMPSYIDVVVKSPLLNVEFSQALVNIRGAVSCKEKCGPSVSVTLVKVDKHNEDRKTIKLTTESSEFLFSDVIPGKYRLEVKHSSPEAVTSKDDWCWEQSFIDVNLGAEDLEGITFVQKGYWVNIISTHNVDGYLTQPDGSNVNLKIKKGSQKICVEYPGVHEFKYVDSCVFFGSSSVKIDTSVLSPVHLKGEKYLLKGQINVQPSSLDSLPKSIVVDIKNGGAGGVDSATAKLKSHEKDQTNTAIYEYSFWANLGEKLTFIPRDSRNDGEKKLLFYPREHHISVADDNCQTYIPTFSSRPGVYIEGSVSPPLSGVHIKLVAAGESSITALKSGEIVLETSTGADGTFVAGPLYDDVGYNVEASKPGYHLKQVGPYSFSCQKLSQISVLIHHKDDVREPIPSVLLSLSGDNGYRNNSVSGDGGSFLFDNLFPGTFYLRPVLKEYAFSPSAQAIELGGGEFKEVVFQATRVAYSATGFVTLLSGQPKGGVSVEARAESKGYFEEAVTDSSGNYRLRGLLPDTVYAVKVAKRDVLGSSNIERASPDSIPVKVGTEDIRGLDFVVFEEPEITIVSCHVEGNGTKELHKHLMVEIKSASDPNKIESVFPLPISNYFQVKGLSKGRHLLQLRSGLPSSSLKFESDIIEVDLEKDTQIHVGPLRYKIDDQMKQELTPAPVFPLIAGLFFIALFLSIPRLKDLYQATVDIPTPGLAATSRKDTRKTTMRKKTY	1192

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Arst6g00804	1192	SUPERFAMILY	Cna protein B-type domain	863	917	-	-
	Arst6g00804	1192	PANTHER	CARBOXYPEPTIDASE REGULATORY REGION-CONTAINING	4	1188	-	-
	Arst6g00804	1192	PANTHER	CARBOXYPEPTIDASE REGULATORY REGION-CONTAINING	4	1188	-	-
	Arst6g00804	1192	SUPERFAMILY	Cna protein B-type domain	146	198	-	-
	Arst6g00804	1192	SUPERFAMILY	Carboxypeptidase regulatory domain-like	327	394	IPR008969	-
	Arst6g00804	1192	Gene3D	Immunoglobulins	143	208	IPR013783	-
	Arst6g00804	1192	SUPERFAMILY	Starch-binding domain-like	218	309	IPR013784	GO:0030246
	Arst6g00804	1192	Gene3D	-	332	405	-	-
	Arst6g00804	1192	FunFam	Carbohydrate-binding-like fold	143	215	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Arst6g00804	K26500		-	gmx:100794049	1981.84

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Arst6g00804	6	7228741	7240080	Arst6g00804	6	7228741	7240080	ECH