Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g00801 ATGGCACCTCCAAATGAACCTGTTATTACTTCACTCACCAAACCCACTTCCTTAGAAAACGTTTTTCACTTGTCAGATTCCAAGCTCTCAGTGAAAGGTGTCCCATTACTCTCTCAAATCCCTCACAATGTCTCTTTCACTCCATTCTCTTCCAAACCCCATTCATCTGATGTTGATGCACCACCTTCACTACTTAACCGTGTTCTTGCTGCTTCTCACAAAGGTGGATTCCTCGGATTCTCACAGTCTGAACCCTCTGATAGGTTGATGAACTCCTTGGGAAGTTTCACTGACAGAAACTTTCTAAGCATATTCAGGTTCAAGACATGGTGGTCAACCCAATGGGTTGGAACCTCTGGCTCTGATCTTCAGATGGAAACTCAATGGGTTCTCCTTCATGTTCCTGAGCTCAATTCCTATGTGATCATCATTCCTATCATTGAAGCAAGTTTCAGGTCTGCCCTCCACCCTGGCTCTGATTCCCACATCATGATTTGTGCAGAGAGTGGCTCCACACAAGTGAAAGCTTCGAGTTTTAATTCAATTGCTTATGTTCATTTGTCTGAGAATCCATACAACTTGTTCAGAGAGGCTTATAGTGCTCTGAGAGTTCATCTCAACACTTTTAAGCTATTGGAAGAGAAGAATCCCCCCAGCATTGTTGACAAGTTTGGTTGGTGCACTTGGGATGCATTCTACTTATCCGTGGAGCCTGTTGGAGTTTTTCATGGCTTGAAGGATTTTGCTGAGATTGGTGGTGTGTCTCCAAGGTTTGTGATCATTGATGATGGATGGCAAAGCATCAATTATGATGATGCTGATGACCCATATGAAGATGCCAAGAATCTTATCTTGGGCGGACAACAAATGACAGCAAGGCTTCACAGGTTTGAAGAATGTGACAAGTTCAAGAGTTACAAAAGAGGACTCATCTTAGGTCCTAATGCTCCTCCTTTTGATCCAAACAAGCCCAAGGCATTGATCTCAAAGGGGATTGAACTTGAACGTTTGGTGAAGAATCGAGACAAAGCAGTTAAATCCGGAAGCTCTGATTTGGCAGAGATTGAAGCAAGGATCAAGTTGGTAGAGAAAGAAATTGATGATCTCTTAGGTGGAGGAGATCAAAACATGAAGAAGAATAAAAGTGAATGTGGAGAAAAGGCAGAGGAGTGTGGATTGAAGGCTTTCACAAGGGATTTGAGGACAAAGTTTAAAGGGTTGGATGATATATATGTATGGCATGCACTTTGTGGTGCATGGGGTGGTGTGAGGCCAGGAGCTACACACCTGAAATCCAAGATAATCCCTTGCAAACTCTCACCAGGACTTGATGGAACTATGCCTGATCTTGCTGTGGTGAAACTTGTTGAAGGTTCCATTGGTCTTGTTCATCCATATCAAGCCAATGACTTTTATGAATCTATGCACTCTTATCTTGCCAAATCTGGTGTTACAGGAGCTAAAATTGATGTCATTCATTGCCTTGAGTATGTGTCTGATGAATATGGAGGCAGAGTTGAGCTTGCAAAGGCTTATTATGATGGATTGACAAACTCCATAGTCAAGAATTTCAATGGAAGTGGAATAATAGCTAGCATGCAGCAGTGCAATGACTTTTTCTTTCTTGGAACAAAGCAAGTTTCCATGGCAAGAGTTGGGGATGATTTTTGGTTCCAAGATCCATATGGTGACCCCATGGGAGTGTTTTGGCTACAAGGGGTACACATGATTCATTGCTCATACAACAGCTTGTGGATGGGGCAAATCATTCAGCCAGATTGGGACATGTTCCAATCAGATCATGTTTGTGCCAAGTTTCATGCAGGTTCAAGAGCCATTTGTGGCTCTCAAGTTTATGTGAGTGACAGTGTTGGCTTCCATGACTTTGATCTCATCAAGAGCCTTGTGTTCCCTGATGGCACTGTCCCTAGATGCATACATTTCCCACTTCCAACAAGAGATTGTCTCTTCAAGAACCCTCTATTTGACCACAAAACTCTCCTCAAAATTTGGAACTTAAATAAGTTTGGAGGAGTTATTGGTGCTTTCAACTGTCAAGGAGCTGGTTGGGATCCTAAAGAACACACATTCAGGGGTTTTCCTGAGTGCTACAAAGCAGTAGAAGGTTCAGTTCATGTGAGTGAAGTTGAATGGGACCAGAAGGATGAAACAGTTCATATGGGTAATGCAGAAGAATATGCAGTGTATCATAACCAAGCTAAGAAGCTGCATTTGATGACTCCTAAATCTGAACCAATTAGATTTACATTACAACCTTCCACCTTTGAACTCTTCAGCTTTGTGGCAGTGACAAAGCTAAGTGGCAGGAATAATATCAAGTTTGCACCAATTGGGATAACAAACATGTTCAATAATGTTGGTACAATTCAAGAATTGGAATATGTTGAGATTGGTGCTAAGGTTAAGGTTAAAGGTGGTGGAAACTTCCTTGCTTACTCAAATGAATCTCCAAAGAAGTTTCAATTGAATGGAGTTGATGTGCCTTTTGAGTGGCTGCCAGATGGCAAGTTAACAGTCAACCTTCCTTGGATTCAAGAGGATGGTGGTGTTTCTGATTTAGCAATTATCTTTTAG 2595 0.4193 MAPPNEPVITSLTKPTSLENVFHLSDSKLSVKGVPLLSQIPHNVSFTPFSSKPHSSDVDAPPSLLNRVLAASHKGGFLGFSQSEPSDRLMNSLGSFTDRNFLSIFRFKTWWSTQWVGTSGSDLQMETQWVLLHVPELNSYVIIIPIIEASFRSALHPGSDSHIMICAESGSTQVKASSFNSIAYVHLSENPYNLFREAYSALRVHLNTFKLLEEKNPPSIVDKFGWCTWDAFYLSVEPVGVFHGLKDFAEIGGVSPRFVIIDDGWQSINYDDADDPYEDAKNLILGGQQMTARLHRFEECDKFKSYKRGLILGPNAPPFDPNKPKALISKGIELERLVKNRDKAVKSGSSDLAEIEARIKLVEKEIDDLLGGGDQNMKKNKSECGEKAEECGLKAFTRDLRTKFKGLDDIYVWHALCGAWGGVRPGATHLKSKIIPCKLSPGLDGTMPDLAVVKLVEGSIGLVHPYQANDFYESMHSYLAKSGVTGAKIDVIHCLEYVSDEYGGRVELAKAYYDGLTNSIVKNFNGSGIIASMQQCNDFFFLGTKQVSMARVGDDFWFQDPYGDPMGVFWLQGVHMIHCSYNSLWMGQIIQPDWDMFQSDHVCAKFHAGSRAICGSQVYVSDSVGFHDFDLIKSLVFPDGTVPRCIHFPLPTRDCLFKNPLFDHKTLLKIWNLNKFGGVIGAFNCQGAGWDPKEHTFRGFPECYKAVEGSVHVSEVEWDQKDETVHMGNAEEYAVYHNQAKKLHLMTPKSEPIRFTLQPSTFELFSFVAVTKLSGRNNIKFAPIGITNMFNNVGTIQELEYVEIGAKVKVKGGGNFLAYSNESPKKFQLNGVDVPFEWLPDGKLTVNLPWIQEDGGVSDLAIIF 864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g00801 864 PANTHER - 22 853 IPR008811 -
Arst6g00801 864 Pfam Raffinose synthase or seed imbibition protein Sip1 22 847 IPR008811 -
Arst6g00801 864 Pfam Raffinose synthase or seed imbibition protein Sip1 22 847 IPR008811 -
Arst6g00801 864 Coils Coil 352 372 - -
Arst6g00801 864 SUPERFAMILY (Trans)glycosidases 392 635 IPR017853 -
Arst6g00801 864 SUPERFAMILY (Trans)glycosidases 215 295 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g00801 Arst-Chr6 7193186 7196588 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g00801 5 864 Glycoside Hydrolase AT4G01970 58.688 0.0 1060
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g00801 K06611 - gmx:100815922 1385.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g00801 6 7193186 7196588 Arst6g00801 6 7193186 7196588 ECH