Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g00778 ATGGGTCTGTCATTCACGAAGCTATTCAGCAGGCTGTTCGCCAAGAAGGAGATGCGTATACTTATGGTCGGTCTCGACGCTGCCGGTAAGACCACCATTCTCTATAAGCTCAAGCTCGGAGAGATCGTTACCACCATTCCCACCATTGGGTTTAATGTGGAAACCGTCGAATATAAGAACATTAGCTTCACTGTCTGGGATGTTGGTGGCCAGGACAAGATCCGTCCTTTGTGGAGACATTACTTCCAAAATACACAAGGACTTATTTTTGTGGTAGATAGCAATGATCGTGATCGTGTTGTCGAGGCTAGGGATGAGCTCCATAGGATGTTGAATGAGGATGAGTTGAGAGATGCTGTGCTTCTAGTTTTTGCAAACAAACAAGATCTTCCAAATGCTATGAATGCTGCTGAAATAACTGATAAGCTTGGTCTTCATTCACTCCGTCAACGTCACTGGTATATCCAGAGCACCTGCGCTACATCTGGTGAAGGACTTTATGAAGGGCTTGATTGGCTCTCAAACAACATTGCAAACAAGGTTAGCAGTTAA 552 0.4475 MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKVSS 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g00778 183 Pfam ADP-ribosylation factor family 5 177 IPR006689 GO:0003924|GO:0005525
Arst6g00778 183 PRINTS GTP-binding SAR1 protein signature 47 71 IPR006689 GO:0003924|GO:0005525
Arst6g00778 183 PRINTS GTP-binding SAR1 protein signature 74 99 IPR006689 GO:0003924|GO:0005525
Arst6g00778 183 PRINTS GTP-binding SAR1 protein signature 119 140 IPR006689 GO:0003924|GO:0005525
Arst6g00778 183 PRINTS GTP-binding SAR1 protein signature 19 42 IPR006689 GO:0003924|GO:0005525
Arst6g00778 183 CDD Arf1_5_like 18 176 IPR045872 GO:0003924
Arst6g00778 183 NCBIfam small GTP-binding protein domain 16 157 IPR005225 GO:0005525
Arst6g00778 183 ProSiteProfiles small GTPase Arf family profile. 11 177 - -
Arst6g00778 183 SMART rab_sub_5 18 180 - -
Arst6g00778 183 Gene3D - 4 183 IPR027417 -
Arst6g00778 183 FunFam ADP-ribosylation factor 1 1 181 - -
Arst6g00778 183 SMART sar_sub_1 1 177 IPR006689 GO:0003924|GO:0005525
Arst6g00778 183 PANTHER ADP RIBOSYLATION FACTOR-RELATED 7 176 IPR024156 GO:0005525
Arst6g00778 183 SMART arf_sub_2 1 181 - -
Arst6g00778 183 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 14 179 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g00778 Arst-Chr6 6951777 6953792 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g00778 K07937 - aew:130791589 368.237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g00778 6 6951777 6953792 Arst6g00778 6 6951777 6953792 ECH
Arst6g00778 6 6951777 6953792 Arst9g01317 9 18251743 18254390 PCT