Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g00735 ATGATTGTTGGGACCATTGCCGCCATTGGAAATGGTATGGGAATGCCTCTCATGACATTAATATTTGGCCAAATGGCAAACGTCTTCGCTGATAACCTGTACAGTGAAGATATTGTCAACCAAGTTTCCAAGATCAGTCTGAAATTTGTGTACTTGGCAATAGGCATAGGTGTTGCAGCATTCCTTCAGGTGGTATGTTGGATGGTGACAGGGGAAAGACAAGCTGCAAGAATAAGGGGTTTGTACTTGAAGACTATTCTAAGACAAGATATTGCTTTCTTTGATAAAGAGACAAACACTGGTGAGGTCATAGGTAGAATGTCAGGTGACACAGTCCTTATTCAAGATGCCATGGGTGAGAAGGTTGGGAAATTTGTGCAGTTAATTGCAACATTTGTTGGAGGGTATGTGATATCATTTGTTAGAGGGTGGCTTCTAACTCTTGTCTTGTTGTCTGCTCTTCCAATTCTCGCTATAGCTGGCGCAGCTTTGGCCATCACGATAGAAAAGATGGCAACCATAGGTCAAAATGCTTATGCAAAAGCAGCACACGTAGTTGAACAGACAATAGGTTCTATAAGAACAGTTGCATCCTTCACTGGGGAAAAGAAAGCAGTATCTAGTTATGAAAAACGTCTTGAAGATGCATACAAATCAGGAGTTAGTGAAGGCATAGCAGCTGGAATGGGTTTTGGTGTTGTTACCTGTGTCATTTTTTGCGGTTATGCTTTAGCTGTATGGTATGGTTCAAAGATGATAATGGAAAAAGGATATAATGGGGGTATGGTGATCAATGTCATGGTTGCTGCATTAAGTGCTTCCATGTCTCTTGGGGAAGCAAGTCCTTGCTTAAGTGCTTTTGCTTCGGGTAAAGCAGCAGCCTATAAAATGTTTCAAACAATTGAGAGAAAGCCTGAGATTGATGCTTATGATCCTACTGGAAAAACATTGGAAGATATTCATGGCGATATAGAATTGAGGGATGTCTATTTCAGTTATCCGGCCAGACCCGAGGAGCTGATATTCAACGGATTCTCTCTGCATATTCCGAGTGGCACAACTGCGGCTTTAGTAGGACAAAGTGGAAGTGGGAAGTCCACAGTTATCAGTTTGATAGAAAGATTCTATGATCCACAGGCAGGTGAAGTTCTTATTGATGGCATTAACATTAGAGAATTTCAGGTTAGATGGATCAGAGGAAAAGTTGGCCTTGTCAGCCAGGAGCCAGTGTTGTTTGCATCTAGCATCAAGGATAACATTGCTTATGGAAAGGAGGGAGCAACAATTGAAGAGATTAAAGTTGCCACTGAACTTGCAAATGCTGCTAATTTCATTGATAAACTGCCAAAGGGATTGGAAACAATGGTTGGTGAGCATGGAACACAACTATCTGGTGGACAGAAGCAACGCATTGCCATTGCAAGAGCTATCCTAAAAGATCCAAGGATTTTGCTTCTAGATGAAGCCACAAGTGCACTTGATGCAGAATCTGAAAGAATAGTGCAAGAGGCCCTAGACAGGATCATGATCAACAGAACTACTGTTATTGTAGCTCATCGCCTAAGCACCGTGAGGAATGCAGACATGATTGCTGTAATTCATAGAGGGAAAATGGTTGAAAAAGGAACACATGTTGAATTAGTCAAGGACCCCGAAGGAGCTTACTCTCAGCTTATACGTTTACAAGAGGTAAGAGAGGAGGATTCATTAAAGAATGCAGACAATCAAAACAAGTCTGAACTCTCAAAAAGTAAAAGGTGGTCATTTCAAAGATCAGAATCATCTATTGGTAGCAGTAGCCGCCACTCGACTTCCTTCGGCATACCTACAGGAGCTAATATCCTTGATCCTAAAGTTGAAACTCCAAGAGAAGAGGATGTACCATCACAAGAGGTTCCACTATGGTGGCTTTTTTCCCTTAACAAACCAGAGATTCCAGTGCTTCTTATGGGATCTATAGCTGCCACAGCAAATGGTGCTATATGGCCAGTGTTTGGTTTGTTGCTTTCTAGTGCCATCAAAACATTTTATGAACCATTCAATGAGTTAAAAAAGGACTCAAGGTTTTGGGCACTAATGTTTGTGACCCTTGGACTTGCATCTTTAATTGCTCTTATAGCAAGAGGATACTTTTTCTCTGTGGCTGGCCATAAGCTAATCCAGCGCATTAGATTGCTATGTTTTGAGAAGGTGATCAACATGGAGGTTTCATGGTTTGATGAGGCTGATCATTCGAGTGGTGCAATCGGTTCAAGGCTCTCGACGGATGCTACATCTGTTCGTGCCCTTGTTGGGGATGCATTAGGACTACTAGTTCAAAATATTGCAACAGCATGTACAGGCTTGATCATTGCTTTCATTGCAAGCTGGCAATTGGCGTTGATCATTGTTGTCATAGCCCCTCTTGTTGGATTGAATGGATATGTTCAAATGAAGTTCTTGAAAGGCTTCAGTTCAGATGCAAAGCGGATGTATGAGGAAGCGAGCCAGGTTGCTAACGATGCAGTTGGAAGCATAAGAACAGTGGCATCTTTCTGCGCTGAAGAGAAAGTTATGGAATTCTATAAGAAGAAATGTGAAGGTCCAAGGAAAACAGGAATAAGGCAAGGCTTGATCAGTGGAATAGGATTCGGGGTTTCATTTTTTCTTCTCTATTGTGTCTATGCAACCTGTTTCTATGCTGGAGCTAGATTTGTGAAGGATGGCAAGGCATCATTCTCAGATGTTTTAAGGGTTTTCTTTGCTTTAACTATGGCAGCTAACGCAATTTCCCAATCAAGCTCACTTGCACCTGATTCTAGCAAAGCCAAGTCAGCTGCTGCTTCCATATTTGGACTTCTTGATATGAAGTCAAAGATAGATCCAAGTGATGAGTCTGGGACAACACTGGATAATGTAAATGGTGAAATTAAGTTTCGCCATGTAGGCTTTAAGTATCCATCTAGACCGGATATACAGATTTTTCGAGACCTAAGTTTGACCATCCATTCTGGCAAAACAGTGGCCCTTGTTGGTGAGAGTGGAAGCGGGAAATCCACAGTGATTGCTTTGTTACAAAGATTCTATGATCCAGATTTTGGTCAAATCACACTTGATGGGATAGAAATTCAGAAATTGCAGCTCAAGTGGTTGAGGCAGCAGATAGGGCTTGTAGGTCAAGAGCCAGTATTATTCAATGACACCATTCGTGCCAACATTGCATATGGTAAAGGAGGCAATGCAACTGAAGCAGAAATCATACAAGTAGCAGAACTGGCCAATGCTCATGGCTTTATTAGTGCCTTACAACAGGGTTATGATACTGTGGTGGGAGAGAGGGGAATACAGTTATCTGGTGGGCAGAAGCAACGTGTAGCCATTGCACGTGCTATAATAAAGAGTCCAAAGATATTGCTACTTGATGAGGCCACAAGTGCATTGGATGCAGAGTCGGAGAGAGTTGTTCAAGATGCATTAGACAAAGTGATTGTGAATAGAAGCACTGTGGTTGTGGCACATCGTCTATCCACAGTTAAAAATGCAGATGTCATTGCTGTAGTTAAAGATGGAGTTATTGTGGAAAAAGGAAGGCATGAGACCCTCATTAGCATGGAGGATGGTTTTTATGCTTCCTTGGTCCAACTTCATTATAGTGCGTCAACAGCATGA 3648 0.4194 MIVGTIAAIGNGMGMPLMTLIFGQMANVFADNLYSEDIVNQVSKISLKFVYLAIGIGVAAFLQVVCWMVTGERQAARIRGLYLKTILRQDIAFFDKETNTGEVIGRMSGDTVLIQDAMGEKVGKFVQLIATFVGGYVISFVRGWLLTLVLLSALPILAIAGAALAITIEKMATIGQNAYAKAAHVVEQTIGSIRTVASFTGEKKAVSSYEKRLEDAYKSGVSEGIAAGMGFGVVTCVIFCGYALAVWYGSKMIMEKGYNGGMVINVMVAALSASMSLGEASPCLSAFASGKAAAYKMFQTIERKPEIDAYDPTGKTLEDIHGDIELRDVYFSYPARPEELIFNGFSLHIPSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINIREFQVRWIRGKVGLVSQEPVLFASSIKDNIAYGKEGATIEEIKVATELANAANFIDKLPKGLETMVGEHGTQLSGGQKQRIAIARAILKDPRILLLDEATSALDAESERIVQEALDRIMINRTTVIVAHRLSTVRNADMIAVIHRGKMVEKGTHVELVKDPEGAYSQLIRLQEVREEDSLKNADNQNKSELSKSKRWSFQRSESSIGSSSRHSTSFGIPTGANILDPKVETPREEDVPSQEVPLWWLFSLNKPEIPVLLMGSIAATANGAIWPVFGLLLSSAIKTFYEPFNELKKDSRFWALMFVTLGLASLIALIARGYFFSVAGHKLIQRIRLLCFEKVINMEVSWFDEADHSSGAIGSRLSTDATSVRALVGDALGLLVQNIATACTGLIIAFIASWQLALIIVVIAPLVGLNGYVQMKFLKGFSSDAKRMYEEASQVANDAVGSIRTVASFCAEEKVMEFYKKKCEGPRKTGIRQGLISGIGFGVSFFLLYCVYATCFYAGARFVKDGKASFSDVLRVFFALTMAANAISQSSSLAPDSSKAKSAAASIFGLLDMKSKIDPSDESGTTLDNVNGEIKFRHVGFKYPSRPDIQIFRDLSLTIHSGKTVALVGESGSGKSTVIALLQRFYDPDFGQITLDGIEIQKLQLKWLRQQIGLVGQEPVLFNDTIRANIAYGKGGNATEAEIIQVAELANAHGFISALQQGYDTVVGERGIQLSGGQKQRVAIARAIIKSPKILLLDEATSALDAESERVVQDALDKVIVNRSTVVVAHRLSTVKNADVIAVVKDGVIVEKGRHETLISMEDGFYASLVQLHYSASTA 1215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g00735 1215 FunFam ABC transporter B family member 1 314 563 - -
Arst6g00735 1215 CDD ABC_6TM_Pgp_ABCB1_D2_like 638 953 - -
Arst6g00735 1215 CDD ABC_6TM_Pgp_ABCB1_D1_like 1 297 - -
Arst6g00735 1215 Pfam ABC transporter transmembrane region 649 918 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst6g00735 1215 Pfam ABC transporter transmembrane region 1 274 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst6g00735 1215 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 960 1208 IPR027417 -
Arst6g00735 1215 FunFam ABC transporter B family member 9 1 320 - -
Arst6g00735 1215 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 649 935 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst6g00735 1215 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 315 562 IPR027417 -
Arst6g00735 1215 Pfam ABC transporter 989 1138 IPR003439 GO:0005524
Arst6g00735 1215 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 2 289 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst6g00735 1215 FunFam ABC transporter B family member 9 937 959 - -
Arst6g00735 1215 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 324 560 IPR003439 GO:0005524
Arst6g00735 1215 CDD ABC_MTABC3_MDL1_MDL2 970 1208 - -
Arst6g00735 1215 SUPERFAMILY ABC transporter transmembrane region 635 954 IPR036640 GO:0005524|GO:0016020
Arst6g00735 1215 SMART AAA_5 351 543 IPR003593 GO:0016887
Arst6g00735 1215 SMART AAA_5 997 1190 IPR003593 GO:0016887
Arst6g00735 1215 MobiDBLite consensus disorder prediction 592 612 - -
Arst6g00735 1215 CDD ABC_MTABC3_MDL1_MDL2 324 562 - -
Arst6g00735 1215 SUPERFAMILY ABC transporter transmembrane region 1 308 IPR036640 GO:0005524|GO:0016020
Arst6g00735 1215 PANTHER ABC TRANSPORTER B FAMILY 1 564 IPR039421 -
Arst6g00735 1215 PANTHER ABC TRANSPORTER B FAMILY 1 564 IPR039421 -
Arst6g00735 1215 Pfam ABC transporter 343 491 IPR003439 GO:0005524
Arst6g00735 1215 ProSitePatterns ABC transporters family signature. 463 477 IPR017871 GO:0005524|GO:0016887
Arst6g00735 1215 Gene3D ABC transporter type 1, transmembrane domain 47 944 IPR036640 GO:0005524|GO:0016020
Arst6g00735 1215 Gene3D ABC transporter type 1, transmembrane domain 47 944 IPR036640 GO:0005524|GO:0016020
Arst6g00735 1215 FunFam ABC transporter B family member 1 628 936 - -
Arst6g00735 1215 Gene3D - 322 580 IPR027417 -
Arst6g00735 1215 Gene3D - 322 580 IPR027417 -
Arst6g00735 1215 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 970 1207 IPR003439 GO:0005524
Arst6g00735 1215 Gene3D - 960 1214 IPR027417 -
Arst6g00735 1215 MobiDBLite consensus disorder prediction 592 610 - -
Arst6g00735 1215 FunFam ABC transporter B family member 1 960 1210 - -
Arst6g00735 1215 ProSitePatterns ABC transporters family signature. 1110 1124 IPR017871 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g00735 Arst-Chr6 6578078 6582726 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g00735 1 1209 Calmodulin-binding Proteins AT2G36910 44.163 0.0 1030
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g00735 K05658 - gmx:100800034 1875.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g00735 6 6578078 6582726 Arst9g01347 9 19076243 19083304 PCT