Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g00669 ATGGCCAAGGAAGCTTCTATCATCCTCTTGTTCCTCTCTTTTATCCTTGTCTTCTGTTCAGGTACATTGGTGGGGTTTTCTTTTGCTGAGAGTGAAGACACTGAATCACCCACATTCATCCAGAGAAACAAGATCTACCATGTGAGTTTGGGGGGGTTTGTTCAATTTAGTGAAGGGATATCAAAATATCTTGAATCAGGAACCCAGATAGCTAGAAGAATAGTAGCATTATATGCAGAAAAATTGCAGATAACTGTTGATGGTTTTGCTCAAAAGGAAGAGATCTTATTTCCTTTGTCTCAGAGAGAAAAAGAACTAAGCAAAGTTTATACAAGAAGAATTTTAGATGAGACAAATAACACACCTTCACCAGTTAATCCTACAAATCCAACTTCAGATACACCAGCCATAATCACAGTTCCTTCATCCACACCAGTTACAGTTTCACCCACCAATCCAACCACTTCAGTGCCTATAACAGTTCCCTCTTCCATACCTCCTCCCTCAACCCCCACAAATCCGGCGAATTCACCTGTACCTGTCACGAACCCTGCGGCTTCTTATCCGCCACCATCGGGGATTGTTCCTGTCACAAACAACCAGCCTCCTCCTGCAACAAGCACAAATGCTCCACCAGCAACTCAGGGTCAGGGTCAGGGTCAGAGCTGGTGTGTGGCAAAGAGTGGAGTCTCAGCAACTGCTCTTCAATCAGCACTTGACTATGCTTGTGGAATGCCTGGTGTAGATTGCTCACAGTTACAGCAAGGTGGGAGTTGTTACAATCCAAATTCTGTTCAAAATCATGCTTCTTTTGCATTCAACAGCTATTACCAGAAGAATCCAGCACCAACAAGTTGTGACTTTGGAGGGACTGCTACCTTAGTCAACACCAACCCAAGTACAGGTTCTTGCATTTACCCATCATCGTCGTCGTCGTCATCATCTTTAACCGGAGCGGGTACATCAGGATCTGCTAGCTCACCATCAGGTTTGGGATTGCTAAGCCCTCCTGATGGAGATTCCTCACATTCAGCTGGTGTAAGACCTTTTCTCGGCTGCATGGTTCTGGCTATAACCTTGGTCACCAGAACACTCATTTTAAACCAATAG 1110 0.4459 MAKEASIILLFLSFILVFCSGTLVGFSFAESEDTESPTFIQRNKIYHVSLGGFVQFSEGISKYLESGTQIARRIVALYAEKLQITVDGFAQKEEILFPLSQREKELSKVYTRRILDETNNTPSPVNPTNPTSDTPAIITVPSSTPVTVSPTNPTTSVPITVPSSIPPPSTPTNPANSPVPVTNPAASYPPPSGIVPVTNNQPPPATSTNAPPATQGQGQGQSWCVAKSGVSATALQSALDYACGMPGVDCSQLQQGGSCYNPNSVQNHASFAFNSYYQKNPAPTSCDFGGTATLVNTNPSTGSCIYPSSSSSSSSLTGAGTSGSASSPSGLGLLSPPDGDSSHSAGVRPFLGCMVLAITLVTRTLILNQ 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g00669 369 FunFam Glucan endo-1,3-beta-glucosidase 4 217 310 - -
Arst6g00669 369 MobiDBLite consensus disorder prediction 162 198 - -
Arst6g00669 369 MobiDBLite consensus disorder prediction 309 340 - -
Arst6g00669 369 MobiDBLite consensus disorder prediction 162 220 - -
Arst6g00669 369 Gene3D - 219 320 - -
Arst6g00669 369 SMART X8_cls 222 306 IPR012946 -
Arst6g00669 369 MobiDBLite consensus disorder prediction 309 331 - -
Arst6g00669 369 PANTHER BETA-1,3 GLUCANASE 134 314 IPR044788 -
Arst6g00669 369 MobiDBLite consensus disorder prediction 117 137 - -
Arst6g00669 369 MobiDBLite consensus disorder prediction 199 220 - -
Arst6g00669 369 Pfam X8 domain 223 293 IPR012946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g00669 Arst-Chr6 5892289 5894425 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g00669 223 307 Glycoside Hydrolase AT4G34480 51.163 5.60e-25 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g00669 - - aip:107645980 553.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g00669 6 5892289 5894425 Arst6g00669 6 5892289 5894425 ECH
Arst6g00669 6 5892289 5894425 Arst9g01486 9 21739682 21743105 PCT