Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g00555 ATGTCTTCCACAGAAGCCATGCGTCTTTTTGTGAAAATATTGGAGGAAGAAGACCCTGGTTGGTATTCAAGAGCATCAAGCTCTGTTGTAGAACCTGTTATAGATGTGCAAATGAATCACGATTCCAAAATTGAACTCGTAAGAGAGAATGGAAATTCTTATCCAGAGACAAAGACTATTTCCACTGAAAATGGAAATCAAGTTGGAACACAAGATAAAGATGTCGTCATGGAGAGCATTGTTCCGGTTGGAGTCTATGATCAATGGATCGCACCACAAATATCCGGTCAGCGTCCTAGGCCCCGATATGAGCATGGAGCAGCGGTCGTGCAAGATAAATTGTACATATATGGTGGAAACCACAATGGCCGCTACCTTGGTGACCTTCACGTTCTGGATTTGAGAAGTTGGACTTGGTCAAAGATTAATGCTAAGGCTGAAGTAGAGTCTTCATCAATTTCAACACGCTGTGCTGGCAATTCTTTGATTCCATGGGGTAACAAGCTTCTTTCGGTTGCTGGGCATTCAAAGGACCCTTCTGAATTTATCCAAGTGAAAATGTTTGATATACAAACTTCAACTTGGTCAACTTTGAAGACTTCTGGCAAAGCTCCAGTGTCACGTGGAGGGCAATCAGCTAACCTTGTTGGAACAAGCTTAGTAATTTTTGGTGGACAAGATGCAAAGGGGACTCTTTTAAATGATCTGTATATTCTTGACCTGGAGACCATGACATGGGATGAAATTGATGCCATTGGAACACCTCCTTCTCCAAGGTCTGATCATACTGCTGCTATACATGTTGAGCGATACTTGCTTATCTTTGGTGGGGCTTCACATACAACTTGCTACAACGATTTACATGTTCTCGACTTGCAAACTATGGAATGGTCTCGACCCACACAACTGGGTGTAATACCAACACCACGAGCTGGACATGCTGGTGTGGCAATAGGGGAGTATTGGTTCATTGTTGGTGGTGGTGATACTAAAAGTGGTGTCTCAGAGACAGTTGTGTTGAATATGTCTACACTGGCTTGGTCAGTGTTAACTTCTGTTGAAAGGCCTATTCCAGTTGCGAGTGAGGGCTTAAGTTTGATTGTAACCTCCTACAATGGTGAAGATGTACTAGTGTCTTTTGGAGGATATAATGGACACTACAACAATGAAGTCTACGTTCTTAAACCAAGCCACAAGTCAACCTTGCAACGCAAAATAATTAAAAATTCCATTCCAGAGAGTGTTTCTGCTACCCAAAATGCCACAAAGGCTGCCCCAGAAGTCGAATCTGAATTGGAAGCTAGCCAAGAAGGGAAAATTAGGGAAATTGTCATGGATAATCATGATCCAGCAAAACCCAAAGGTGATCTTATATTGGTCCTAAAGACCGAGAAACATGAGTTGGAACAATCACTAAGCAAAGAGAGACTAAATGCTCTTCAGCTAAAGCAAGAGTTGGCAGATGCAGAGACTCGTAATTCTGAGCTATACACGGAGCTCCAATCAGTACGTGGTCAACTTGCTGCTGAGCAGTCTAGGTGTTTCAAACTTGAGGTGGAGGTTGCAGAATTAAGTCAGAAGCTCCAAACCATTGGAACCTTACAGAGAGAGCTCGAACTCCTACAGCGGCAGAAAGCCGCATCGGAACAAGCTGCCCTGAACGCAAAGAAGAGACAGGGCTCAGGTGTGTGGGGTTGGCTTGCACCTCCACCTAACCAGAGAGAAGATGATGTCTAA 1737 0.4364 MSSTEAMRLFVKILEEEDPGWYSRASSSVVEPVIDVQMNHDSKIELVRENGNSYPETKTISTENGNQVGTQDKDVVMESIVPVGVYDQWIAPQISGQRPRPRYEHGAAVVQDKLYIYGGNHNGRYLGDLHVLDLRSWTWSKINAKAEVESSSISTRCAGNSLIPWGNKLLSVAGHSKDPSEFIQVKMFDIQTSTWSTLKTSGKAPVSRGGQSANLVGTSLVIFGGQDAKGTLLNDLYILDLETMTWDEIDAIGTPPSPRSDHTAAIHVERYLLIFGGASHTTCYNDLHVLDLQTMEWSRPTQLGVIPTPRAGHAGVAIGEYWFIVGGGDTKSGVSETVVLNMSTLAWSVLTSVERPIPVASEGLSLIVTSYNGEDVLVSFGGYNGHYNNEVYVLKPSHKSTLQRKIIKNSIPESVSATQNATKAAPEVESELEASQEGKIREIVMDNHDPAKPKGDLILVLKTEKHELEQSLSKERLNALQLKQELADAETRNSELYTELQSVRGQLAAEQSRCFKLEVEVAELSQKLQTIGTLQRELELLQRQKAASEQAALNAKKRQGSGVWGWLAPPPNQREDDV 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g00555 578 Pfam Galactose oxidase, central domain 212 257 - -
Arst6g00555 578 Gene3D - 85 181 IPR015915 GO:0005515
Arst6g00555 578 MobiDBLite consensus disorder prediction 549 578 - -
Arst6g00555 578 SUPERFAMILY Kelch motif 153 398 IPR015915 GO:0005515
Arst6g00555 578 Gene3D - 182 425 IPR015915 GO:0005515
Arst6g00555 578 Pfam Galactose oxidase, central domain 270 318 - -
Arst6g00555 578 Coils Coil 465 558 - -
Arst6g00555 578 PANTHER ACYL-COA-BINDING DOMAIN-CONTAINING PROTEIN 5 461 567 - -
Arst6g00555 578 Pfam Kelch motif 101 142 IPR006652 GO:0005515
Arst6g00555 578 FunFam Acyl-CoA-binding domain-containing protein 4 184 417 - -
Arst6g00555 578 ProSiteProfiles Acyl-CoA-binding (ACB) domain profile. 1 23 IPR000582 GO:0000062
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g00555 Arst-Chr6 4987477 4994607 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g00555 1 577 Acyl Lipid Metabolism Gene Families AT3G05420 69.625 0.0 841
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g00555 - - adu:107492130 1142.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g00555 6 4987477 4994607 Arst6g00555 6 4987477 4994607 ECH
Arst6g01013 6 9269254 9270544 Arst6g00555 6 4987477 4994607 PCT