Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g00082 ATGGGAGATAGTGAAACAGTAGTTGCCGAAGCACTTGCAGCTGAGACACATGCTGCTGCTGGGTTTGGTGACTCTGCCTCGAACCCTACTCAGGAAGCAGCTTCTACTGTTGCTGAGCCTGCTGCAGAGGCTGCTACTCAAGCCAATTCAGCTTATGCCTTAGGTTATTCGAATACTGGCGACGGGAATGCTTATGCTGGGGATCCTAATGCTATGCAACCAGAAGCCCAAACCAATTCAATGGAGGATTCCAAGCAAGGTACTGAAGCTCCAAGTGGGCTTGGAAATGCAGCTACAGGCTCAAGTCAAGTAAATGGTGGTCCAGTGGGTGCAATAGCAGATGCAACAGGACTTGAAAATGGGAATGCATTAGGGAACACTGATGGATCGGCTGATGAGAAACAGCTTGCGGATGGTTATGCTGCCATGTCTGCTGAAGAAGATCGACTGTGGAATATTGTAAGAGCTAATTCTTCAGATTTTACGGCTTGGACTTCCTTGATCGAAGAGACAGAGAAGGTGGCCGAGGATAACATTCTGAAGATTCGAAGAGTTTATGATGCTTTTCTAGCTGAGTTTCCCTTATGTTATGGTTATTGGAAGAAATATGCTGATCATGAGGCACGGCTTGGCTCTGTCGATAAAGTTGTTGAAGTTTATGAACGTGCTGTTCAAGGTGTTACCTATTCAGTGGACATGTGGTTGCATTATTGCATATTTGCTATAAGCACGTATGGGGATCCAGACACTGTGCGTAGGCTTTTTGAACGAGGATTAGCTTATGTTGGAACAGATTATCTTTCTTTTCCTCTTTGGGACAAGTACATTGAATATGAGTACATGCAGCAAGACTGGGCCCGTCTTGCCAATATCTACACTAGAATATTAGAGAATCCAAATCAGCAACTGGATCGATATTTCAACAGCTTCAAGGAGTTAGCTGCAAATCGACCTCTTTCAGAGCTACAAACTGCTGATGAAGCTGCTGTAGTGGCAGGTGCTGCTTCAGAGGCTGCTGACCAAACTGTTGAGGGAGAGGTTCGTCCTGATGGTGCAGAAAATTCTCCTAAACCTGTAAGTGCTGGATTAACAGAAGCAGAAGAGTTGGAGAAGTATATCGCCATTAGAGAAGAGATGTATAAGAAAGCTAAAGAGTTCGATTCTAAGATCATTGGTTTTGAAACAGCTATCAGGAGGCCATACTTTCATGTACGGCCACTCAATGTTGGAGAGCTTGAAAATTGGCATAATTATCTGGATTTTATAGAGAGGGAAGGTGACTTAAGCAAGATTGTCAAGTTATATGAGAGGTGTGTCATTGCATGTGCCAATTACCCTGAGTACTGGATACGCTATATTTTGTGTATGGAAGCCAGTGGAAGTATGGATCTTGCAAATAATGTGCTTGCTCGGGCAACCCAAGTCTTTGTCAAGAGGCAACCTGAAATACATCTTTTTTCTGCTCGGTTTAAGGAGCAGTCTGGAGATATAGCTGGTGCTAGAGCTGCCTATCAACTTGTTCATACTGAAATTTCTCCTGGTCTTCTTGAAGCAATAATCAAGCACGCGAATATGGAACATCGACTGGGAAAGTTGGAGGATGCCTTCTCTTTGTATGAACAAGCCATTGCCATTGAAAAGGGAAAAGAACATTCCCAAACATTGCCGATGCTGTTTGCTCAATTTTCTCGATTTGTCTATTTGGCTTCTGGGAATGCAGAAAAGGCAAGACAGATTCTAGTTGAAGGGGTTGAGAATGTTATGATGTCGAAACCGCTACTTGAGGCTTTATTGCATTTTGAGGCTATTCAGCCCCCACCAAAGCGAGTTGATATGAACTATTTGGAGTCATTGGTAGTCAAATTTATAATGCCTAACCCTGAGAGTCCTGGTGTTGTAAGTGCAGCTGAGCGGGAGGAACTTTCTAGCATTTTTTTGGAGTTTTTGAATCTCTTTGGAGATGTCCAATCTATCAAGAGGTGTGAGGATAGGCATGCCAAATTGTTCTTGCCACACAGGAGCATGTCAGAGTTAAAAAAACGTCATGCTGAGGACTTTTTAGCTTCAGATAAAGCAAAAATGGCAAGATCTTATTCTGTTCCATCAGCTGCCCAATCTGCAGTGGGTGCATATCCAAATGCACAGAATCAGTGGGCTAATTATGGTGTACAACCTCAAGCTTGGCCACCAGCCACACAGGCACAACAGTGGCCTGCTGGCTACACTCAGCCGGCTTCATATGGGGCTTATGCTGGATATGGAGCTAACTATCCAAATTCTCAGGTGCCTGCATCAGTTCCACAAAATACTGCTTATGGAGCCTATCCAGCAGCATATCCGGTACAGCCGGCCGTTCCCCAGCAAAGTTATGCACAACCTGCAGCGGCTGTGGCTTCTGCAGCGGCTGTGGCTCCTGCTCAGCAACCTGCTGCAGTTCCTCAAGCCTATTACGGGAGTTATTACTGA 2466 0.4473 MGDSETVVAEALAAETHAAAGFGDSASNPTQEAASTVAEPAAEAATQANSAYALGYSNTGDGNAYAGDPNAMQPEAQTNSMEDSKQGTEAPSGLGNAATGSSQVNGGPVGAIADATGLENGNALGNTDGSADEKQLADGYAAMSAEEDRLWNIVRANSSDFTAWTSLIEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARLGSVDKVVEVYERAVQGVTYSVDMWLHYCIFAISTYGDPDTVRRLFERGLAYVGTDYLSFPLWDKYIEYEYMQQDWARLANIYTRILENPNQQLDRYFNSFKELAANRPLSELQTADEAAVVAGAASEAADQTVEGEVRPDGAENSPKPVSAGLTEAEELEKYIAIREEMYKKAKEFDSKIIGFETAIRRPYFHVRPLNVGELENWHNYLDFIEREGDLSKIVKLYERCVIACANYPEYWIRYILCMEASGSMDLANNVLARATQVFVKRQPEIHLFSARFKEQSGDIAGARAAYQLVHTEISPGLLEAIIKHANMEHRLGKLEDAFSLYEQAIAIEKGKEHSQTLPMLFAQFSRFVYLASGNAEKARQILVEGVENVMMSKPLLEALLHFEAIQPPPKRVDMNYLESLVVKFIMPNPESPGVVSAAEREELSSIFLEFLNLFGDVQSIKRCEDRHAKLFLPHRSMSELKKRHAEDFLASDKAKMARSYSVPSAAQSAVGAYPNAQNQWANYGVQPQAWPPATQAQQWPAGYTQPASYGAYAGYGANYPNSQVPASVPQNTAYGAYPAAYPVQPAVPQQSYAQPAAAVASAAAVAPAQQPAAVPQAYYGSYY 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g00082 821 Gene3D Tetratricopeptide repeat domain 152 321 IPR011990 GO:0005515
Arst6g00082 821 FunFam Tetratricopeptide repeat (TPR)-like superfamily protein 405 697 - -
Arst6g00082 821 PANTHER PRE-MRNA PROCESSING PROTEIN PRP39-RELATED 131 792 - -
Arst6g00082 821 MobiDBLite consensus disorder prediction 72 106 - -
Arst6g00082 821 Gene3D Tetratricopeptide repeat domain 406 707 IPR011990 GO:0005515
Arst6g00082 821 MobiDBLite consensus disorder prediction 64 113 - -
Arst6g00082 821 SUPERFAMILY TPR-like 154 316 IPR011990 GO:0005515
Arst6g00082 821 MobiDBLite consensus disorder prediction 20 45 - -
Arst6g00082 821 MobiDBLite consensus disorder prediction 340 359 - -
Arst6g00082 821 FunFam Putative pre-mrna-processing factor 39 152 322 - -
Arst6g00082 821 SMART hat_new_1 426 458 IPR003107 GO:0006396
Arst6g00082 821 SMART hat_new_1 530 565 IPR003107 GO:0006396
Arst6g00082 821 SMART hat_new_1 211 243 IPR003107 GO:0006396
Arst6g00082 821 SMART hat_new_1 246 281 IPR003107 GO:0006396
Arst6g00082 821 SMART hat_new_1 177 209 IPR003107 GO:0006396
Arst6g00082 821 SMART hat_new_1 283 316 IPR003107 GO:0006396
Arst6g00082 821 SMART hat_new_1 571 603 IPR003107 GO:0006396
Arst6g00082 821 SUPERFAMILY TPR-like 370 673 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g00082 Arst-Chr6 837857 845815 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g00082 K13217 - gmx:100787373 1258.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g00082 6 837857 845815 Arst6g00082 6 837857 845815 ECH