Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g00079 ATGCTTCTCAGAAGCTCTTCAACCCCAATTCTTGGTTCCCTCCACTCATCCTTCACAGACAGTCCTAATAACAATAGCATTCACTCTGAATCCTGCCATGCATTCAAGCATCATCTTCCACCATGTGTCCCTCAACATCATCACCAAAAAATCTCTTTCCATCAATCTCCCTTTATGCAGTTCTCATGCACTTCCTCTCCAATCTCACCCTCAATCTCTGAAGGCCAATGCAAAGGCTTCAGAAGAGTTCAGTCTGAAGGGAACTTGGAGGATTTAGCTATTGCTACTTGCAACAACAACAATGAAGACATAGTAGGAGATATTCCTTTCAAGAGATTTTCAGCAAGACCAAAGTGTATGGTACTTGAGACTATTCCCTCTTTCTCTGTTACCAAGCACAAAGGCTTGTGCGAAGAAGATGCAGACGATGAAGAAACCGACAGTGACAGTGACATTGAATATGAGAAAGGAAGTGGAAGCTTAATGAATCTTCAAAAGGGTATGGTACTGTCTGAAGAAGTGAGAGATGGAAGCTGCAGGGTAGGTTTTGCTGAGAGGGAAGAAGAGTTTGGTGGTAAACAAATGTATCTTGCAAGAGGGCTTGGAGTTGATGTCTGCGTGGATGGCATAGGTGGTTGCAGGGGTGGTAGAGGTGGTGGCAGTGGTGGTGGTGGTGGTGATTATAACTCCATGAGCTCTGGAGGAAATGATGGAGATAGATCTGGGGTGGAAGAATATTACAAGAAGATGCTGGAAGAAAATCCTGGGAACCCTTTGTTTCTGAGAAATTATGCTCAGTATTTGTATCAGTGCAAAGAAGACCGTGAAGGAGCCGAGGAGTATTATTCGCGTGCCATCCTAGCAGATCCAAAAGACGGCGATGTTCTATCACAGTATGGGAAGCTAGTTTGGGAGCTACACAAGGACGAAGAACGAGCGTCAGCCTATTTTGAAAGAGCGGTACAAGCCTCTCCTGAAGACAGCCATGTACATGCAGCATATGCAAGTTTCCTTTGGGACACAGAGGAGGGTGAGGATGATTGCAATGATTCAGAGTGTTTGCCACCACAATTTCATCAAGGAGCTATGGCTACTGCTAGTGCCTAA 1107 0.4499 MLLRSSSTPILGSLHSSFTDSPNNNSIHSESCHAFKHHLPPCVPQHHHQKISFHQSPFMQFSCTSSPISPSISEGQCKGFRRVQSEGNLEDLAIATCNNNNEDIVGDIPFKRFSARPKCMVLETIPSFSVTKHKGLCEEDADDEETDSDSDIEYEKGSGSLMNLQKGMVLSEEVRDGSCRVGFAEREEEFGGKQMYLARGLGVDVCVDGIGGCRGGRGGGSGGGGGDYNSMSSGGNDGDRSGVEEYYKKMLEENPGNPLFLRNYAQYLYQCKEDREGAEEYYSRAILADPKDGDVLSQYGKLVWELHKDEERASAYFERAVQASPEDSHVHAAYASFLWDTEEGEDDCNDSECLPPQFHQGAMATASA 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g00079 368 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 1 342 - -
Arst6g00079 368 SMART hat_new_1 238 270 IPR003107 GO:0006396
Arst6g00079 368 SMART hat_new_1 273 305 IPR003107 GO:0006396
Arst6g00079 368 SMART hat_new_1 308 340 IPR003107 GO:0006396
Arst6g00079 368 MobiDBLite consensus disorder prediction 218 239 - -
Arst6g00079 368 Gene3D Tetratricopeptide repeat domain 229 346 IPR011990 GO:0005515
Arst6g00079 368 SUPERFAMILY TPR-like 243 343 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g00079 Arst-Chr6 819705 821777 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g00079 - - gmx:100788436 410.609