Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g00055 ATGGCGGATTTAGAGAATTTGCTTTTGGAGGCTGCAGGGAGGACCGGGAGAAACCGAAATTCTATTCCGCCTTCTAGAAGAGGACGTGATGATGGGTATTCGGATGGTGGGACTGACTCTAGGGAGGATGATTCTGATGGTGAGATTGGTTATGCTGGCAGAAAGCCCTCTGGATCTCAAGTTCCTCTCAAAAAGAGATTAGATCCAGCGGAGAGGGATGATAATGAGGGAAGTCAGGAAGGGGGTGATGATGTTGATGGCCGTTCTGATCATGAGGATGATAGTAGTAGCGAATCGAATATTGGCGATGATCTTTATAAGAATGAAGATGATAGACGGAAGCTTTCTGAGATGACTGAACTTGAAAGAGAGATGATATTGTCGGATAGGGCTTCTAAAAAGGATGATAAAAATCTGCTGGGGAAGATAGTGTCAAAGCGGGAAAAAGGAAAGGCAAGTGTACCTAGAAAACAGACTCCTCCTCTCCCATCATCCCGTGTGCGTTCATCAGCCAGATCTGCTGACAGATCAACTGCCAAGGATGATGCGTTAAATGAACTGCGTGCAAAGCGTTTGAAACAGCAGGATTCAGAGGCAAACCGCAAGATGACAGAGGCATCTGGAGGTTCAGGGACTGGATTTTTAGCCAAGCACAGACCTTTCACTTCAACGGGCTTTAGTAGCTCAAGTCAAAGTGAGAGTGAAAGTGGATCTCATAGTGACGATGAAAGAATTGTTGACAGTGATGATGACAGGGCATTATCTGGATTTGAGGGTCCTTCATTTGAGGATATAAAAGAAATCACCATTCCCCGGTCAAAACTTGCAAAATGGTTTATGGAGCCTTTCTTTGAGGAGTTAATTGTTGGTTGTTTTGTGAGAGTTGGCATTGGTAGATCAAAATCTGGGGCTATTTACAGGCTATGCATGGTGAAAAATGTTGATGCGACAGATCCTGATCGACAGTACAAATTAGAGAATAGAAGCACACACAAGTACTTGAATCTTGTCTGGGGAAATGAAACTTCTGCTGCAAGGTGGCAAATGGCTATGGTTAGTGACTCTCCTCCACGAGAGGAGGAGTTTAAACAGTGGCTTAAGGAACTGGAGCGAACTGGTGGTCGGATGCCAATCAAACGAGATGTGTTAGATAAAAAACAAGCTATAAAAAAGATCAACACGTTTGTTTACTCAGCAGCTACTGTAAAGCAGATGCTACAAGAGAAAAAATCTGCCTCATCAAGGCCGCTAAATGTTGCGGCTGAAAAGGATCGCCTGAGGAATGAGTTGGAAAAGGCAATACTTATGCATAATGAAGCTGAAGTGGAGAGGATCCGGGCAAGGCTGCAGGAATTGGAGGCATCCAGGGAAGCTAGGGAGAAGAATGCTAAGGCATTGAGGCTTGCTGAGATGAACAGAAAGAACAGGTTTGAAAACTTAAAAAATGCTTCCGACTTGAAGCGGAAAGCTTTGAAAGCAGGGGATGCAGGTTATGATCCATTTTCCAGGAGATGGACTAGATCAAGGAACTATTATGCTGCAAAACCTGGTGAAGAGGCTGCTGACAGAAACAACAGTGCTGGCAGCAAAGTGGCCATTGCAGGAAGCACTATCCCGAATGTAGCTGTGAACGCAGAGGCTGGCATGGTGGCTACAGCTGTGGCCTTGGAAGCTGCTGCTGATGCTGGGAAGTTAGTTGACACAAGTGCACCCGTCGATCAAGGGACAGAGTCAAACATGCTTCACAATTTTGAGCTGCCGATTTCATTATCATCGCTTCAAAGGTTTGGGGGATCCCAAGGAGTTGAGGCAGGGTTTATGGCTAAAAAGCAGAAAGTAGAAGCAACAGTTGGATTTAGAGTCCCAGAAAATGATGGAAGAAGGCACGCGTTGACATTAACAGTTAGTGATTACAAGAGAAGAAGAGGGCTCCTTTGA 1938 0.451 MADLENLLLEAAGRTGRNRNSIPPSRRGRDDGYSDGGTDSREDDSDGEIGYAGRKPSGSQVPLKKRLDPAERDDNEGSQEGGDDVDGRSDHEDDSSSESNIGDDLYKNEDDRRKLSEMTELEREMILSDRASKKDDKNLLGKIVSKREKGKASVPRKQTPPLPSSRVRSSARSADRSTAKDDALNELRAKRLKQQDSEANRKMTEASGGSGTGFLAKHRPFTSTGFSSSSQSESESGSHSDDERIVDSDDDRALSGFEGPSFEDIKEITIPRSKLAKWFMEPFFEELIVGCFVRVGIGRSKSGAIYRLCMVKNVDATDPDRQYKLENRSTHKYLNLVWGNETSAARWQMAMVSDSPPREEEFKQWLKELERTGGRMPIKRDVLDKKQAIKKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRNELEKAILMHNEAEVERIRARLQELEASREAREKNAKALRLAEMNRKNRFENLKNASDLKRKALKAGDAGYDPFSRRWTRSRNYYAAKPGEEAADRNNSAGSKVAIAGSTIPNVAVNAEAGMVATAVALEAAADAGKLVDTSAPVDQGTESNMLHNFELPISLSSLQRFGGSQGVEAGFMAKKQKVEATVGFRVPENDGRRHALTLTVSDYKRRRGLL 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g00055 645 MobiDBLite consensus disorder prediction 158 172 - -
Arst6g00055 645 SMART rtf1 259 371 IPR004343 GO:0003677
Arst6g00055 645 FunFam RNA polymerase-associated protein RTF1 260 392 - -
Arst6g00055 645 Gene3D - 260 392 IPR036128 GO:0003677
Arst6g00055 645 MobiDBLite consensus disorder prediction 1 258 - -
Arst6g00055 645 MobiDBLite consensus disorder prediction 23 50 - -
Arst6g00055 645 MobiDBLite consensus disorder prediction 221 235 - -
Arst6g00055 645 SUPERFAMILY Plus3-like 261 391 IPR036128 GO:0003677
Arst6g00055 645 Pfam Plus-3 domain 264 369 IPR004343 GO:0003677
Arst6g00055 645 Coils Coil 423 469 - -
Arst6g00055 645 MobiDBLite consensus disorder prediction 173 200 - -
Arst6g00055 645 MobiDBLite consensus disorder prediction 236 257 - -
Arst6g00055 645 ProSiteProfiles Plus3 domain profile. 259 394 IPR004343 GO:0003677
Arst6g00055 645 MobiDBLite consensus disorder prediction 65 154 - -
Arst6g00055 645 PANTHER UNCHARACTERIZED 85 644 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g00055 Arst-Chr6 662208 665164 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g00055 K15178 - gmx:100818650 907.516