Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g00047 ATGGCAACGATGTGGAATTCTTTATGCGTGGCCAATGGCACTCTCTTCAACTCTTCTTCTCCACTTCTTCCTCTTCGTTTCAATTCTAACTCCAACCTTCGATTTCGCCGCGCCACAATCACAAGCATGTGCGTTCCTGAAAACGACGTCGTTGTGATCGGTTACGGAATGACTACAGTTGACTTCTTGGCCACCGTTGACTCTTTTCCGAAGCCCGACGACAAGGTCCGCACCACCTCCTTCAAGGTTCAAGGAGGTGGCAATGCCGGCAACGCCTTAACCTGCGCCGCAAGACTCGGCTTGAAGCCTAAGCTCATCTCCAAGGTCGGCGACGATTCCCAAGGCCACGCTATTCTCAACGAGCTTCAGCGCGACGCCGTCGACACCTCCTTTGTCCTGGTATCAAAGGGTGGTAGTTCCGCGTTTTCGTATATTCTAATCGACAACCAGACAAAAACTCGGACTAGTATTTACACCCCTGCACATCCTCCCATGATGCCAGATGATCAATCCCAATCAACCTTATTATCTGCATTTAATGAAGCAAGATTAGTGTATTTTGATGGACTGACTACCGATACTGCTCTATTCATTGCACAAGAGGCCACTCGAAATAAGATACCGATTTTAGTTGAGGCCGAATCACCTAAGGAAGGATTGGATGAGCTTCTGAAACTTGCTGACTTTGCTGTATGCTCTGCAAGGTTTCCTAAGGCTTGGACACATGCATCATCTATCCCAAGTGCACTGGTTTCCATGCTTTTAAGATTGCCAAATATCAAATTTGTGATTGTGACTTTGGGTGAAGATGGATGTCTAATGTTGGAAAGAAGTGCAAACGAGGATGCTGATACAGAAGAAAAGGATATAGATTGTTTCTTTGAATCCTTATATGAAAGGAAGGATGATAGCTTGGCTGTCCCAACCTGTATATCGTCGGGGGTGAAAAAATTTAGAGCAAACGGAAGAGGGACAGTTTGTGGAAGATTCTTTCTTGGAACAGCAGAGAGGATACCGGATGGTGAGCTGATCGATACAACTGGTGCTGGAGATGCATTTATTGGTGCTATTCTTTATGCAATCTGCACAAACATGGAACCAGAGAAAATGTTACCATTTGCTGCTCAAGTGGCAGCTGCCAAGTGTAGGGCTTTGGGAGCTAGAACTGGTCTTCCATATCTGACAGATCCACGCCTAGCAGCCTATTTATGCTAG 1215 0.4609 MATMWNSLCVANGTLFNSSSPLLPLRFNSNSNLRFRRATITSMCVPENDVVVIGYGMTTVDFLATVDSFPKPDDKVRTTSFKVQGGGNAGNALTCAARLGLKPKLISKVGDDSQGHAILNELQRDAVDTSFVLVSKGGSSAFSYILIDNQTKTRTSIYTPAHPPMMPDDQSQSTLLSAFNEARLVYFDGLTTDTALFIAQEATRNKIPILVEAESPKEGLDELLKLADFAVCSARFPKAWTHASSIPSALVSMLLRLPNIKFVIVTLGEDGCLMLERSANEDADTEEKDIDCFFESLYERKDDSLAVPTCISSGVKKFRANGRGTVCGRFFLGTAERIPDGELIDTTGAGDAFIGAILYAICTNMEPEKMLPFAAQVAAAKCRALGARTGLPYLTDPRLAAYLC 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g00047 404 SUPERFAMILY Ribokinase-like 49 395 IPR029056 -
Arst6g00047 404 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 345 358 IPR002173 GO:0016301
Arst6g00047 404 Gene3D - 50 389 IPR029056 -
Arst6g00047 404 CDD ribokinase_group_B 51 393 - -
Arst6g00047 404 PANTHER PHOSPHOTRANSFERASE SYSTEM TRANSPORT PROTEIN 42 403 - -
Arst6g00047 404 Pfam pfkB family carbohydrate kinase 336 392 IPR011611 -
Arst6g00047 404 Pfam pfkB family carbohydrate kinase 49 280 IPR011611 -
Arst6g00047 404 PRINTS Ribokinase signature 81 100 IPR002139 GO:0016301
Arst6g00047 404 PRINTS Ribokinase signature 263 274 IPR002139 GO:0016301
Arst6g00047 404 PRINTS Ribokinase signature 54 75 IPR002139 GO:0016301
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g00047 Arst-Chr6 606260 609560 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g00047 - - gmx:100792838 571.237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g00047 6 606260 609560 Arst6g00047 6 606260 609560 ECH
Arst6g00047 6 606260 609560 Arst6g00047 6 606260 609560 PCT