Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g04568 ATGTCGATGCTCGATTCGTTCTTCAAACAGGGTTTTAAGGCTGCTAAATGTAAAACCCTGCTGAAGCTGACAATTCCACGCATAAAGCTTCTAAGGAACAGAAGAGATATCCAGTTAAAGAATATGCGGCGGGAGATTGCCAAGCTACTTGAGACTGGTCAAGAAGCCACAGCTCGCATCAGGGTGGAGCATATTATCAGAGAGGAGAACATGATGGCTGCCCAGGAAATCATTGAACTGTTCTGTGAACTGATTGCTGTGCGACTTCCAATAATCGAGGCACAAAGGCTGCCAAATATGGGAAGGAATTTTTATCTTCTGCTACTGAGCTCAGGCCGGACTGTGGTGTTAATCGCCAGTTAATAGAGCTGCTGTCGGTTCGTGCTCCGTCACCTGAAAAGAAACTGAACCTTCTAAAAGAAATTGCTGTTGAGCATGAGATAGAATGGGATCCGGCTGCTTCAGAAACCGAGTTCTTTAAGAAACACGAGGACTTGCTGAATGGCCCCACACAATTTGTTGGGTCAAACGTGCCACCACCTGAAGAAAAACAGGATGAAGAGTCAGACACTGCTCGTGATACATTCAATAAAGAACAACCTGATTCTGATTCCGATTCGGACATATTAGACTTCCCTGATGTGCCTAAGGTATCGGTCCAGCCAAATGCAAATGTTGCCACAGCTCCAGGAGTTGTTCCACCTCCTGAAGTTGATCTTCGTTCATCTAGCTACTCTGGAGATATCCCAGATATAAGGCATGAGCAAGTTCATGAGATATCAACTATTCAGAGAGATGAACCCCAGAATACATCTGGTAAAATGGAAAGCAAGCAGTTTGTGCCATTCATCTCCCCTCCTTCACTACCGCCTGGATCATATTCTACCAGACATAGTGATTCTCCTCCCCCCATGTCGAACACAAAAACTGAAGCCAATGTGGACTCCTTGTCAAGCTCAAAATCTGAAGCCAATGTGGACCTACAGGATGTGTTGGCTGCTGCTCATGCTGCCGCAGAAACTGCTGAACGTGCTGCAGCTGCAGCTCGCTCAGCAGCTAGTCTTGCTCAAGTCCGGATTAGTGAGCTTACCAGGAAAAACAGTGAACAGTCACCTGATAGCAGCTCTGTGAACCCATTTTATGCAGGTGGGGACAATCAATCTGTTACAGAAAGGGGACATCTAGCTAAGCATAATTCTGGAGGTACCTCTGATGGCAGTGGCGGAAATACTCCTGAACTTAATCAGGATCACTTTGCTTCACCAGACTCTCATTCTCGTTCACCAAGTTTTCCTTCATTCGATACACTCAAAGCAGATTTTGATACTTCTTTACCAAAAAATGATATAGTGGGAGAGAAATTCTCTGCTCACCAGCCTAATAGATTGCCTTCATTAGATGATGATCCATATTTTTCATACCCCAACTTATTTTCCCGGCAAAGCTCAAATATAGGATCACAGAATCATCATTCAGATAATAGCCGTTCCACTCATGATATGTGA 1505 0.4472 MSMLDSFFKQGFKAAKCKTLLKLTIPRIKLLRNRRDIQLKNMRREIAKLLETGQEATARIRVEHIIREENMMAAQEIIELFCELIAVRLPIIEAQRECPLDLKEAISSVCFAAPRCADLPELLQVQQAFAAKYGKEFLSSATELRPDCGVNRQLIELLSVRAPSPEKKLNLLKEIAVEHEIEWDPAASETEFFKKHEDLLNGPTQFVGSNVPPPEEKQDEESDTARDTFNKEQPDSDSDSDILDFPDVPKVSVQPNANVATAPGVVPPPEVDLRSSSYSGDIPDIRHEQVHEISTIQRDEPQNTSGKMESKQFVPFISPPSLPPGSYSTRHSDSPPPMSNTKTEANVDSLSSSKSEANVDLQDVLAAAHAAAETAERAAAAARSAASLAQVRISELTRKNSEQSPDSSSVNPFYAGGDNQSVTERGHLAKHNSGGTSDGSGGNTPELNQDHFASPDSHSRSPSFPSFDTLKADFDTSLPKNDIVGEKFSAHQPNRLPSLDDDPYFSYPNLFSRQSSNIGSQNHHSDNSRSTHDM 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g04568 534 MobiDBLite consensus disorder prediction 296 311 - -
Arst5g04568 534 MobiDBLite consensus disorder prediction 390 418 - -
Arst5g04568 534 MobiDBLite consensus disorder prediction 323 356 - -
Arst5g04568 534 MobiDBLite consensus disorder prediction 508 525 - -
Arst5g04568 534 MobiDBLite consensus disorder prediction 214 238 - -
Arst5g04568 534 FunFam IST1-like protein isoform A 6 192 - -
Arst5g04568 534 MobiDBLite consensus disorder prediction 203 356 - -
Arst5g04568 534 Pfam Regulator of Vps4 activity in the MVB pathway 18 181 IPR005061 GO:0015031
Arst5g04568 534 MobiDBLite consensus disorder prediction 368 534 - -
Arst5g04568 534 Coils Coil 39 59 - -
Arst5g04568 534 PANTHER IST1 FAMILY MEMBER 14 514 IPR005061 GO:0015031
Arst5g04568 534 Gene3D - 5 192 IPR042277 -
Arst5g04568 534 MobiDBLite consensus disorder prediction 433 466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g04568 Arst-Chr5 106724509 106727560 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g04568 - - aprc:113867022 718.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g04568 5 106724509 106727560 Arst5g04568 5 106724509 106727560 ECH