Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g04481 ATGGCTGCTGCAGAAGAAGAAAGCGCTGTGAAGGAGCCTTTGGATCTGATAAGGCTGAGCCTCGACGAGCGCATCTATGTCAAGCTCCGTTCCGACCGTGAACTTCGCGGCAAACTTCATGCTTACGATCAGCATCTTAATATGATCCTTGGTGATGTTGAAGAAATTGTTACTACTGTTGAAATTGATGATGAAACATACGAAGAAATTGTGAGGACGACAAGGCGTACTGTTCCTTTCTTGTTTGTTAGGGGAGATGGAGTGATATTGGTTTCCCCGCCGCTGAGGACTGCATGA 297 0.4646 MAAAEEESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETYEEIVRTTRRTVPFLFVRGDGVILVSPPLRTA 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g04481 98 Pfam LSM domain 17 93 IPR001163 -
Arst5g04481 98 ProSiteProfiles Sm domain profile. 12 97 IPR047575 GO:0003723
Arst5g04481 98 SUPERFAMILY Sm-like ribonucleoproteins 12 94 IPR010920 -
Arst5g04481 98 CDD LSm3 12 93 IPR034105 GO:0000398|GO:0003723
Arst5g04481 98 PANTHER U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM3 4 97 IPR040002 GO:0003723
Arst5g04481 98 Gene3D - 3 95 - -
Arst5g04481 98 SMART Sm3 15 93 IPR001163 -
Arst5g04481 98 FunFam U6 snRNA-associated Sm-like protein LSm3 3 95 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g04481 K12622 - atri:130810139 190.274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g04481 5 106120135 106121443 Arst5g04481 5 106120135 106121443 ECH