Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g04451 ATGATGAGAAATTACATTTTGAAATGTGTGTATGCATTAGTGCTACTTATGTTATATGATGCAGGATCAATCCATGGAGAAGTGAAATGCATTGAGAAAGAGAGGCAAGCACTCCTCAGCTTCAAAGAAGGCATAAATGATCCTTGGGACGTGCTGTCAACATGGAGGGACGATGATTGTTGCAAATGGCAGGGAATTGTATGCAGCAATCAAACAGGTCATGTACTCCACCTTCATCTCCATGGATGGGGTTCTCATTATTTGATTGGTCAAGCGAATATTTCCATGTTGATTGACTTGAAAAATCTTGAATATTTAGATCTCAGTTACAATGATTTTTTTGACAGTCATATCTCAAAACACATTGGCTTGTTCACCAAGTTAAGATATATAAACCTGTCATATTGTGGTTTTTTTGGTAATATTCCTTATCAGATAGGGAATTTATCACAACTGCAGTACCTTGATATCAATCATAATTATCTTGATGGAGCAATTCCATATCAACTCAAACACTTGGGACAGCTACAATATCTTGGTCTTCGAGGTTATGCTGAATTTTCAGGGACAATCCCATTTCAGAGTGGTGATCTTCCATTGCTGCACACTCTCAAGCTTGGTGGTGACTTTGTTCTCAAAACTAAAGATGCAGAGTGGATGTCTAATCTCTCATTTTTAAAGAATCTTGACTTTGCTTCATTGAGTATTGGCAACTCTTATCAATGGCTTCAAATGATTCGTAAGCATATTCTGAAGTTAACAGAATTGAGGCTATCAAATTGCAATCTTTCTGATAATGATGTTGAGTTTTTGGTTGATATTCATTCCAATTATTCTTTCATTCCTTCCCTTACCATCCTTGATTTCTCTTATAATATGTTAACATCATCCACATTTCAATTGTTGTCCAACTTCGGCTCTAATCTTCGGGAGCTATATCTTTCACATAATAGTATTGATTTGTCACATCTTCATTACACAAACTTTCCTTCTCTTGCAAGCCTTGACCTTTCTTACAATAATCTCAGTTCATCAGTGTTTCAAGGCAATTTCAACTTTGGCTCCAACCTTCAAGAGCTAGATTTGTCAAATTGCAATCTTATGGATACAAGTTTTCTCATGTCATCTACTTCCATTATGAATTCTTCATATTCTCTTGTTGTCCTTCATCTCTCCTCTAACCTGTTGAAATCTTCAAATATATTCCACTGGATTTTCAACTTCACAGCCAGTCTTCACACCCTTGATCTTAGTGGCAACTTGTTAGAAGGTCCTATTCCAAACAGTTTAGACAAAGCAATGAACTGTGTTGAATATCTTGATCTCTCTAATAACAAGCTGCAAGGAGAAATTCCACATTTCTTCGGAAATATTTGTACCTTGCAAACACTAAACTTACACATGTTTCATGAGCTATACTTGTCTTACAATCAAATCACTGGTGTGATACCTAAAAGCATCATATTGTTATCTGAGTTGGAGTCTCTGACCCTACAGAATAATTCTTTGCAGGGTGAAATCACTGAATCACATCTCACAGCCCTTTCAAAATTAAAATACTTGCACTTGTCTCAAAACTCATTATCTCTAAAGTTTGTCCCAGGTTGGAATCCTCCTTTTCAGTTAATAGATTTGAGACTAGCATCTTGCAGGTTGGGTCCTAGCTTTCCAAGTTGGCTATACGCTCAAAATAATTTATATTCTCTGGATATTTCAGATGCTGGGATTAATGGTTCTGTACCCGAGTGGTTTTGGTATAAGTTGCAAGTTGTTGGATATTCTTTGAATATGTCTCACAATAATTTTGTAGGTGCTATTCCAAGTTTACCGCTAAGGTTTCCACTCACCGCAGCATGTATAGATTTGAGTTCAAATAAATTCGAGGGTGCGATTCCACCTTTCTTGCTGCATTCTTCATCATTGATTCTCTCTAAAAACAAATTTTCAGATATATCATCAATGTTGTATGAAAGCAACACTGGCAGGAACTTGGGAACTCTAGTTTTAGCAAACAATCAATTGAAAGGTTTGTTGCCTGACTGTTGGGATTCTATAAGCTCATTATTGTTTCTTGATCTAAGTAATAATAATCTGATAGGAAAGATTCCACCATCTATAGGCTCCCTTGTCAAATTGGAAGCTTTGGTCTTAAGAAACAATAGATTCACAGGCAAACTACCTTCTAGTTTGAAGAATTGCACCAACTTATTTTTGTTGGATGTCAGTGAAAATTTTTTATCAGGTCCAATACCCTCTTGGATTGGTGAGAGTCTACAGCAATTGATAGTTCTCAGCATGTCAGGAAATCTTATTTCTAGATATACATTTAACATAACAGTAATGTGGAAAGGTGTTAAATGTGGATTTAAGAATCCAGAGTTGCGTCTAAATAGCATTGACCTCTCGAGCAATCATTTTACTGGTGAAATCCCAAATGAGATTGTGTACTTGGTTGGATTAGTTTCTTTGAATCTTTCAAGAAACAATTTGAGTGGAGAAATTCCTTCTCAAATAGGGAACATAACTTCACTAGAATCCTTAGACTTATCAAGAAACCATATATCTGGCACAATCCCCTCAAGTCTTTCTCAGATTGATAATCTAGGCGTGTTAGAGTTGTCAAACAACTCTCTTTATGGAAGAATCCCACCTGGAAGACACATGGATACCTTTGACGCATCTAGCTTTGAAGGAAATCATAATCTTTGTGGTACACAACTTAACAAAACTTGTCCTGGAGACATGCCAGAAGTAAAGCCTCAAGAACCAACAAGACATGATGATGCAGATGATAATTCAGATTTTTATGAAGCATTATACATGAGCTTAGGCTTTGGATTTTTCACTGGCTTCTGGGGCCTTTTAGGACCATTGTTGTTTTGGAGGTCTTGGAGAATTGCTTATCTCAGATTCTTGAACCAAGTGGCAGACTACATATATGTGACAGTGGCAGTATATGTAGCAAAATTTCACAAGACTGCAAGAGGTGTTCAATACTGA 3000 0.3657 MMRNYILKCVYALVLLMLYDAGSIHGEVKCIEKERQALLSFKEGINDPWDVLSTWRDDDCCKWQGIVCSNQTGHVLHLHLHGWGSHYLIGQANISMLIDLKNLEYLDLSYNDFFDSHISKHIGLFTKLRYINLSYCGFFGNIPYQIGNLSQLQYLDINHNYLDGAIPYQLKHLGQLQYLGLRGYAEFSGTIPFQSGDLPLLHTLKLGGDFVLKTKDAEWMSNLSFLKNLDFASLSIGNSYQWLQMIRKHILKLTELRLSNCNLSDNDVEFLVDIHSNYSFIPSLTILDFSYNMLTSSTFQLLSNFGSNLRELYLSHNSIDLSHLHYTNFPSLASLDLSYNNLSSSVFQGNFNFGSNLQELDLSNCNLMDTSFLMSSTSIMNSSYSLVVLHLSSNLLKSSNIFHWIFNFTASLHTLDLSGNLLEGPIPNSLDKAMNCVEYLDLSNNKLQGEIPHFFGNICTLQTLNLHMFHELYLSYNQITGVIPKSIILLSELESLTLQNNSLQGEITESHLTALSKLKYLHLSQNSLSLKFVPGWNPPFQLIDLRLASCRLGPSFPSWLYAQNNLYSLDISDAGINGSVPEWFWYKLQVVGYSLNMSHNNFVGAIPSLPLRFPLTAACIDLSSNKFEGAIPPFLLHSSSLILSKNKFSDISSMLYESNTGRNLGTLVLANNQLKGLLPDCWDSISSLLFLDLSNNNLIGKIPPSIGSLVKLEALVLRNNRFTGKLPSSLKNCTNLFLLDVSENFLSGPIPSWIGESLQQLIVLSMSGNLISRYTFNITVMWKGVKCGFKNPELRLNSIDLSSNHFTGEIPNEIVYLVGLVSLNLSRNNLSGEIPSQIGNITSLESLDLSRNHISGTIPSSLSQIDNLGVLELSNNSLYGRIPPGRHMDTFDASSFEGNHNLCGTQLNKTCPGDMPEVKPQEPTRHDDADDNSDFYEALYMSLGFGFFTGFWGLLGPLLFWRSWRIAYLRFLNQVADYIYVTVAVYVAKFHKTARGVQY 999
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g04451 999 FunFam Nuclear pore complex protein NUP107 31 185 - -
Arst5g04451 999 PRINTS Leucine-rich repeat signature 841 854 - -
Arst5g04451 999 PRINTS Leucine-rich repeat signature 332 345 - -
Arst5g04451 999 SUPERFAMILY L domain-like 57 398 - -
Arst5g04451 999 Gene3D Ribonuclease Inhibitor 125 323 IPR032675 -
Arst5g04451 999 Pfam Leucine Rich repeat 252 271 IPR001611 GO:0005515
Arst5g04451 999 Gene3D Ribonuclease Inhibitor 471 918 IPR032675 -
Arst5g04451 999 Gene3D Ribonuclease Inhibitor 26 121 IPR032675 -
Arst5g04451 999 FunFam Tyrosine-sulfated glycopeptide receptor 1 593 915 - -
Arst5g04451 999 ProSiteProfiles Leucine-rich repeat profile. 843 865 IPR001611 GO:0005515
Arst5g04451 999 SUPERFAMILY RNI-like 320 608 - -
Arst5g04451 999 Gene3D Ribonuclease Inhibitor 324 470 IPR032675 -
Arst5g04451 999 Pfam Leucine Rich Repeat 411 431 IPR001611 GO:0005515
Arst5g04451 999 Pfam Leucine Rich Repeat 688 709 IPR001611 GO:0005515
Arst5g04451 999 Pfam Leucine Rich Repeat 843 863 IPR001611 GO:0005515
Arst5g04451 999 Pfam Leucine Rich Repeat 711 733 IPR001611 GO:0005515
Arst5g04451 999 PANTHER UNNAMED PRODUCT 470 945 - -
Arst5g04451 999 Pfam Leucine rich repeat N-terminal domain 33 69 IPR013210 -
Arst5g04451 999 Pfam Leucine rich repeat 470 528 IPR001611 GO:0005515
Arst5g04451 999 SUPERFAMILY L domain-like 641 906 - -
Arst5g04451 999 SMART LRR_typ_2 841 865 IPR003591 -
Arst5g04451 999 SMART LRR_typ_2 685 709 IPR003591 -
Arst5g04451 999 SMART LRR_typ_2 817 840 IPR003591 -
Arst5g04451 999 SMART LRR_typ_2 490 517 IPR003591 -
Arst5g04451 999 SMART LRR_typ_2 758 781 IPR003591 -
Arst5g04451 999 SMART LRR_typ_2 662 684 IPR003591 -
Arst5g04451 999 SMART LRR_typ_2 329 349 IPR003591 -
Arst5g04451 999 SMART LRR_typ_2 100 125 IPR003591 -
Arst5g04451 999 SMART LRR_typ_2 281 304 IPR003591 -
Arst5g04451 999 ProSiteProfiles Leucine-rich repeat profile. 308 328 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g04451 Arst-Chr5 105804527 105807953 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g04451 11 964 Miscellaneous Gene Families AT1G74190 28.267 1.92e-64 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g04451 - - adu:107490833 1922.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g04451 5 105804527 105807953 Arst5g04451 5 105804527 105807953 ECH