Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g04448 ATGAGCAATTACTTTCAGAAATGGGATTATGCATTATTAGTGGTGCTTATTATGTTGTATGATGCAGGATTAATCCATGGGGAAGTTACATGCTTAGAGAATGAGAGGCAAGCACTCCTCAGCTTCAAACAAGGCATTCATGATGATAGGGGCATGCTGTCGACATGGAGCAACGATGATTGTTGCAAATGGCAGGGAATTACATGCGGCAACCAAACAGGTCATGTACTCCGCCTTCATCTCCGTGGATCATATTCACATCATTTATCTGGTCAAGCCAATATCTCCACTTTGATTGACTTGCAATATCTTCAACATTTAGATCTCAGTTACAATAGTTTTCTTGGTAGTTATATCTCAGAACATATTGGCTTGTTTCCCAAGTTAAAATATCTCAATCTCTCACGAGCTGATTTTGTAGAAAGTATTATTCCTTATCAACTAGGGAATTTGTCTCAACTACAGTACCTTGATATAAGTCATAATCATTTTGGTGGAGAAATCCCTCCTCAACTAAGCAAGCTTACACATTTACAGTATTTGGATCTCAGCTACAATGATCTTGATGGAGTTATCCCATATCAACTCAAACACTTGGGACAACTACAATATCTCTGTCTTCAAGGGAATAGTGATCTTTCAGGAGCAATCCCTTTTCAAAGTGGTGATCTTCCATTGCTGCACACTCTCAAGCTCCGTGGTGACTTTGATCTTGAAACTCAAGGTGTAGAATGGGTGTCTAAACTCTCCTTTTTAAATACTCTTGACTTCAGTTCAATGAGTCTTGGCAACTCTCACCAGTGGCTTCAAATGATTCGTAAGCATATTCCAAACTTAACAGAGCTGAGGCTGTCGGATTGTAGTCTTTCTGATAATGATGTTCAACTTTTGTTTCATATTCATTCTAACTATTCTTCCACTACTCCCCTTACCATCCTTGATTTCTCTTATAATATGTTGACATCATCCACATTTCAGTTGTTGTCCAACCTCAGCTTTAACCTTCGGGAGCTTTATCTTTCATCTAATGATATTGTTTTGTCACAATCTCATTACCCAAACTTTCCTTCTCTAGTGAGCCTTGACCTTTCTTATAATAATCTCACTTCATTACTGTTTCAAGGAAATTTCAACTTCGGCTCCAACCTTGAAATGCTTTATTTGTCAAATTGCAGTCTTACAGATACAAGTTTTCTGGTGTCATCTACTTCCATTGTGAATTCTTCATCTTCTATTGTTAGCCTTCATCTCTCCTTTAACCTGTTGACATCATCAAACATATTCCACTGGATTTTCAACTTCACAGCCAATCTTCACACCCTTTCTCTTCGTGACAACTTATTAAAAGGTCCTGTTCCACTAGGTTTTGACAAAGCAGTGAACTCTCTTGAATATCTCGATCTCTCTCATAACAATCTGCAAGGAGAGATTCCCCATTTCTTTGGAAACATTTGCACACTACAATCACTACACTTGTCATATAACAACTTGAGTGGGGACTTTTCAAGATTCATTCAAAATTCTTCATGGTGCAACAGACACATATTTCAGGAGCTATCTTTGTCCTACAATCGAATTACTGGTGTGATACCTAAAAGCATCGGGTTATATGAGTTGGAACTTATGTACCTACGTGGGAATTCTTTGAAGGGTGAAATCACTGAATCACATCTCACAAGCTTTTCCAAATTAAAATACTTGTCTTTGGCTTACAATTCATTATCTCTAAAGTTTGTTCCCAGATGGATTCCTCCTTTCCAGTTAATAATTTTGAGGCTAGCATCTTGCAAGTTGGGTCCTAACTTTCCAAGTTGGCTACACACTCAAAATTACTTAGATTATCTGGATATTTCTAATGCGGGGATTCATGGCTCTGTGCCGGAGTGGTTTTGGTATAAGATTCATTTTCCTGAGTTTTATTTGAATATGTCTCACAATAATTTTACAGGAGCTATTCCAAATTTACCACTAAGGCCCCAACACGGAAGATCTACAGATTTGAGTTCAAATCAATTTGAGGGTGTCATTCCATCCTTTTTGCTACATTTTTCATGGTTGATTCTCTCTGAAAACAAATTTTCAAATGTATCATCACTGTTGTGTCAAGAGAACAACATTGGTAGGAAATTGGGCACTCTAGATTTATCAAACAATCAATTGAAGGGTTCATTGCCTGATTGTTGGAAATCTTTAAGCTCACTATTGTTTCTTGATCTAAGTAATAATAACTTGATAGGGAAGATTCCACCATCCATGGGCTCCCTTGTCAAATTGGAAGCTTTGGTCTTACGAAGCAATGGATTCATTGGCAAACTACCTTCTAGTTTGAAGAACTGCACCAGTTTATTTTTGTTGGATGTCAGTGAAAATTTTCTGTCAGGTCCAATACCCTCTTGGATCGGTGAGAGTCTACACCAATTGATAGTTTTGAGCATGTCAGGAAATAGTTTCTCTGGAAATCTTTCTAAGCATCTCTGTTACTTGAAGAAAATTCAACTGTTGGATCTTTCCAGAAATAACTTATCAAATGAAATTCCAACATGCTTAAAGAATTTCACTGCAATGTCCAAAAAGAGCATCAACTCAACTGAAACCGCAAGTCTTATATATTGGTACAACAGTACTTATATTGAGATTTATGGTTTTTATTTTTCTTATACATTTAACATAACAGTAATGTGGAAAGGTGTTAAATGTTGA 2700 0.37 MSNYFQKWDYALLVVLIMLYDAGLIHGEVTCLENERQALLSFKQGIHDDRGMLSTWSNDDCCKWQGITCGNQTGHVLRLHLRGSYSHHLSGQANISTLIDLQYLQHLDLSYNSFLGSYISEHIGLFPKLKYLNLSRADFVESIIPYQLGNLSQLQYLDISHNHFGGEIPPQLSKLTHLQYLDLSYNDLDGVIPYQLKHLGQLQYLCLQGNSDLSGAIPFQSGDLPLLHTLKLRGDFDLETQGVEWVSKLSFLNTLDFSSMSLGNSHQWLQMIRKHIPNLTELRLSDCSLSDNDVQLLFHIHSNYSSTTPLTILDFSYNMLTSSTFQLLSNLSFNLRELYLSSNDIVLSQSHYPNFPSLVSLDLSYNNLTSLLFQGNFNFGSNLEMLYLSNCSLTDTSFLVSSTSIVNSSSSIVSLHLSFNLLTSSNIFHWIFNFTANLHTLSLRDNLLKGPVPLGFDKAVNSLEYLDLSHNNLQGEIPHFFGNICTLQSLHLSYNNLSGDFSRFIQNSSWCNRHIFQELSLSYNRITGVIPKSIGLYELELMYLRGNSLKGEITESHLTSFSKLKYLSLAYNSLSLKFVPRWIPPFQLIILRLASCKLGPNFPSWLHTQNYLDYLDISNAGIHGSVPEWFWYKIHFPEFYLNMSHNNFTGAIPNLPLRPQHGRSTDLSSNQFEGVIPSFLLHFSWLILSENKFSNVSSLLCQENNIGRKLGTLDLSNNQLKGSLPDCWKSLSSLLFLDLSNNNLIGKIPPSMGSLVKLEALVLRSNGFIGKLPSSLKNCTSLFLLDVSENFLSGPIPSWIGESLHQLIVLSMSGNSFSGNLSKHLCYLKKIQLLDLSRNNLSNEIPTCLKNFTAMSKKSINSTETASLIYWYNSTYIEIYGFYFSYTFNITVMWKGVKC 899
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g04448 899 SUPERFAMILY L domain-like 517 692 - -
Arst5g04448 899 Gene3D Ribonuclease Inhibitor 517 869 IPR032675 -
Arst5g04448 899 ProSiteProfiles Leucine-rich repeat profile. 462 484 IPR001611 GO:0005515
Arst5g04448 899 Pfam Leucine Rich repeats (2 copies) 709 749 IPR025875 -
Arst5g04448 899 FunFam Calmodulin-binding receptor kinase CaMRLK 103 219 - -
Arst5g04448 899 SUPERFAMILY L domain-like 663 855 - -
Arst5g04448 899 Gene3D Ribonuclease Inhibitor 460 515 IPR032675 -
Arst5g04448 899 FunFam LRR receptor-like serine/threonine-protein kinase GSO2 557 658 - -
Arst5g04448 899 Gene3D Ribonuclease Inhibitor 31 190 IPR032675 -
Arst5g04448 899 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 703 796 - -
Arst5g04448 899 SMART LRR_typ_2 101 126 IPR003591 -
Arst5g04448 899 SMART LRR_typ_2 175 198 IPR003591 -
Arst5g04448 899 SMART LRR_typ_2 460 483 IPR003591 -
Arst5g04448 899 SMART LRR_typ_2 708 730 IPR003591 -
Arst5g04448 899 SMART LRR_typ_2 151 174 IPR003591 -
Arst5g04448 899 SMART LRR_typ_2 731 755 IPR003591 -
Arst5g04448 899 SMART LRR_typ_2 355 375 IPR003591 -
Arst5g04448 899 SMART LRR_typ_2 828 851 IPR003591 -
Arst5g04448 899 SUPERFAMILY RNI-like 106 530 - -
Arst5g04448 899 Gene3D Ribonuclease Inhibitor 191 459 IPR032675 -
Arst5g04448 899 PRINTS Leucine-rich repeat signature 358 371 - -
Arst5g04448 899 PRINTS Leucine-rich repeat signature 460 473 - -
Arst5g04448 899 Pfam Leucine rich repeat N-terminal domain 33 69 IPR013210 -
Arst5g04448 899 PANTHER LRR RECEPTOR-LIKE KINASE 144 195 - -
Arst5g04448 899 Pfam Leucine rich repeat 173 210 IPR001611 GO:0005515
Arst5g04448 899 Pfam Leucine rich repeat 437 497 IPR001611 GO:0005515
Arst5g04448 899 Pfam Leucine Rich repeat 277 297 IPR001611 GO:0005515
Arst5g04448 899 Pfam Leucine Rich repeat 154 167 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g04448 Arst-Chr5 105778411 105789814 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g04448 666 856 Receptor kinase-like Gene Family AT5G46330 32.420 3.71e-16 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g04448 - - ahf:112802960 1130.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g04448 5 105778411 105789814 Arst5g04448 5 105778411 105789814 ECH