Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g04344 ATGGAGGCACCATTACTAATGAGAGAGTCAAGTCCTCCAACAGAATCTGATGATTACCTGGAAGTGAAGAACTTGAAGGATGCAAAATTTGTGTTGTGCAGTGAGACAGTGAAGTTATGGAAGATTGCAGGGCCAGTGGCACTCTCCTCACTCTTTCAGTTTCTCACAGTTTCTTCACTCAACATCTATGCTGGTCACCTTGGAGACATTGTTCTATCTTCCATCTCTCTTTACCTTGGTGTCATATCCTCCTTTTATTATAATTTCTTGTTTGGCATGTCATCAGCACTGCTAACACTATGTGGACAAGCTTATGGAGCAGGACAAGTTAAATCCACTGGAATCTATCTCCAAAGATCATGGATTGTGCTAACTATGAGCTGCATAATCCTCTTACCAACTCACATTTATGCAACTCCAATCTTAGAGTTCCTTGGCCAAGACAAAGAAATATCAGAGCTTGCTGGAAACTATGCATTGAAAGCAATTCCATCCATGTTCTCCTTTGCTTTCATACTCCCCACACAAAGATTCCTTCAAGCTCAAAGCAAGGTTATGGTGATAACATGCATAACATTTGTGGCCCTACTTGTACAAAATTTGCTTCTTTATGTCTTCATCTATGGATTTGATTGGGGCTCAACAGGGTTGGCTATGGCTCATAGTGTCTCACATTGGGTTCTTGCTTTGGCTCTTGTTGTGTATGCTTCTTGTTGGTGTAAGGAAGGTTGGAGTGGTTATTCTTTCTTGGCTTTCAAAGATTTGTTGCCATTTACTTGGCTAAGTCTTTCTTTATCTGTTATGACATGCTTGGAGCAATGGTATTCTACTTTCATTGTCCTTCTTGCTGGTCACTTAGACAACCCTGTTATTGCTCTTGCTTCCTATTCTATTTGCACCAATATTCAGGGTTGGTACTTGATGCTGCTACTTGGAATAAGCACTGCCATAAGTGTTCGAGTGTCCAATACGCTTGGCATGTCACATCCAAGAGCAGCAAGATACTCATTCATTGTGACAATGTGTGAATCTCTCATCATTGGAATTTCATTCATGAGTGTTGTTTTGTTGTGTAAACAAAACCTTGCCATGATCTTCACCAACAGTGAGGATTTGATCAGAGCAGTGGCTGATTTAGCTTACCTTCTTGCTCTAACCATGCTTCTTAGTAGTGTTTCACAAGTCATATCAGGTGTTGCAATTGGAAGTGGATGGCAGGTGATGATTGGATACATAAACTTGGCATGTTATTATATTGTTGGACTCTCTCTTGGCTATTTTCTTGGTTTCAATTACCATGTGGGACTTAAGGGTCTGTGGGGTGGCACACAGTGCGGTAGTGTCATTCAAATATTTGTCCTTATACTAATTATTTGGAAGACCAACTGGACCAAGGAGGTGGAACAAACAGCTAACCGAATGAGAATATGGGGCTCTAGCAACCACCACAAGGAGATGATGGCTATATAA 1470 0.4095 MEAPLLMRESSPPTESDDYLEVKNLKDAKFVLCSETVKLWKIAGPVALSSLFQFLTVSSLNIYAGHLGDIVLSSISLYLGVISSFYYNFLFGMSSALLTLCGQAYGAGQVKSTGIYLQRSWIVLTMSCIILLPTHIYATPILEFLGQDKEISELAGNYALKAIPSMFSFAFILPTQRFLQAQSKVMVITCITFVALLVQNLLLYVFIYGFDWGSTGLAMAHSVSHWVLALALVVYASCWCKEGWSGYSFLAFKDLLPFTWLSLSLSVMTCLEQWYSTFIVLLAGHLDNPVIALASYSICTNIQGWYLMLLLGISTAISVRVSNTLGMSHPRAARYSFIVTMCESLIIGISFMSVVLLCKQNLAMIFTNSEDLIRAVADLAYLLALTMLLSSVSQVISGVAIGSGWQVMIGYINLACYYIVGLSLGYFLGFNYHVGLKGLWGGTQCGSVIQIFVLILIIWKTNWTKEVEQTANRMRIWGSSNHHKEMMAI 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g04344 489 NCBIfam MATE family efflux transporter 45 440 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Arst5g04344 489 CDD MATE_eukaryotic 35 469 IPR045069 GO:0042910|GO:1990961
Arst5g04344 489 Pfam MatE 45 203 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Arst5g04344 489 Pfam MatE 266 426 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Arst5g04344 489 PANTHER MULTIDRUG RESISTANCE PROTEIN 31 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g04344 Arst-Chr5 105218520 105222614 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g04344 K03327 - gmx:100789611 650.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g04344 5 105218520 105222614 Arst5g04344 5 105218520 105222614 ECH