Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g04325 ATGTCTGAAGCTTCTATGGCAGTCATGAAACCTGAGATGAAATCTTATATATGGCTTAAAACTGTGGATGGTTCTATTCAACAAGTAGAGCAAGATGTAGCCATGTTTTGCCCCATGATTTTCCAGGAAATACTTAAGACAGGCATGGGATCTTCCAAAACTTATGCCATATCTCTTCCACAACGTGTCAATCCTTCAATCTTGGGTTTAATACTTGACTACTGTCGTTTCCACCAAGTGCCAGGCCACTCTAATAAGGAGCGGAAAACCTTTGATGAAAAGTTTATTAGGATGGACACAAAGAAGTTATGTGAATTGACATCTGCTGCTGATAGCCTCCAATTGAAGCCTTTGGTTGACCTGACCAGCCGAGCACTTGCTCGGATTATAGAAGGAAAAACACCAGAGGAGATTCGTGAAACATTTCATTTGCCTGATGACCTCACTGAGGAGGAGAAACTCGAGCCTCTTAGAAATGTAACTGATGATCCACGTATTCGACTTCTAAACAGATTATATGCTAGGAAAAGGAAAGAGTTGAAAGAAAAGAAGAAACTAAAGGAGTTGGATTCTGTTCCCTTTGCATGTCACAATCACAATGTTGACAATGCCTTAAAGGCCTCTCCAAGCAAACACTCACAGACGCAAGATTTACCTCCCATGAGTTTTTCTCCAAAGCTCGAGTTTATTGATGGTGATCTTGATGATGAATTAGATCCTGCAATGAAGGAGGAACTTGACAGGGAAGTGGAAGATTTTGCTCGAAGATTAAATTCAGATTGGCCCGAAAGGATGCAAATTTTATCTTTGGGCCAAGACAGAAGACTAGTTCCAATTTCTATGAATAGCAATGTTTCCACACGCATCTTCACAGGTATGGGTTAA 885 0.4068 MSEASMAVMKPEMKSYIWLKTVDGSIQQVEQDVAMFCPMIFQEILKTGMGSSKTYAISLPQRVNPSILGLILDYCRFHQVPGHSNKERKTFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLEPLRNVTDDPRIRLLNRLYARKRKELKEKKKLKELDSVPFACHNHNVDNALKASPSKHSQTQDLPPMSFSPKLEFIDGDLDDELDPAMKEELDREVEDFARRLNSDWPERMQILSLGQDRRLVPISMNSNVSTRIFTGMG 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g04325 294 SMART skp1_3 14 115 IPR001232 GO:0006511
Arst5g04325 294 FunFam SKP1-like protein 21 isoform X1 11 161 - -
Arst5g04325 294 SUPERFAMILY POZ domain 15 79 IPR011333 -
Arst5g04325 294 SUPERFAMILY Skp1 dimerisation domain-like 90 157 IPR036296 GO:0006511
Arst5g04325 294 Pfam Skp1 family, dimerisation domain 116 153 IPR016072 GO:0006511
Arst5g04325 294 PANTHER SKP1 13 154 IPR016897 GO:0006511
Arst5g04325 294 Coils Coil 166 189 - -
Arst5g04325 294 Gene3D Potassium Channel Kv1.1; Chain A 10 160 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g04325 Arst-Chr5 105069331 105072806 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g04325 - - gmx:100808004 417.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g04325 5 105069331 105072806 Arst5g04325 5 105069331 105072806 ECH