Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g04317 ATGGCCTCTGCTTCGCTTCTTCTCACTCTCTCCACGCTTTCGCTGCTTCTTTCACCCTCTTTTTCCGCCAGCAGCAGGAAAGAACTAAGGGAGAAGGAGGGGTTGCTGTTGTTGAAGAAGGAAAATGCATCATCACATTATATGTTAGGGTTAGGCCACTCAGTTAATCCAAACAGCATTGATCCAACACGTGTTGTCCAGATCTCATGGCAACCAAGAGTTTTTCTATATAGAGAGTTCTTGTCTGCCAAGGAGTGTGACTACCTTATTTCTTTGGCGTATGATCTGAACGAAAAATCCTTTGATGCGGCCAATGGGAGACTTGCATCGGAAACTTCGTTGGATATCGAAGATGATATTGTTGCAAAGATTGAAGAAAGAATTTCGCTTTGGACTTTCCTTCCTAAAGAGAACAGCAAGCCTTTGCAGGTCAAGCATTATGAGCTTGAACAGGATGGCCAGAACTTAGATTATTTTACGAACAAGACCAAATTGGAATCAAATGGACCTCTAATGGCAACCGTTATTTTATATCTCTCAAATTCTACACAAGGGGGTCAAATTCTCTTTCCCGAATCAGAGCCGAAGAGTAGCGGCATGTCGGATTGTGGAGAAAGTAACAAGTTTCTCCAGCCAGTAAAAGGGAATGCAGTTCTGTTCTTCTCCCTCCACCTAAGTGCAACTCATGACAAGAGGAGTATACATTCTAGATGCCCTATCCTTAAGGGGGATATGTGGTCTGCAATTAAATACTTATATGCAAAACCAATTGGTGAGAGTAAGGTCCCAACCGTATCAGATGGTGGTGATTGTATTGATGAGGATGACAATTGCGCTGCTTGGGCGGCCATGGGAGAATGTCAACGAAATCCTGTGTTCATGATTGGTTCCCAAGATTATTATGGTACATGTAGGAAAAGTTGTCATTTATGTTGA 936 0.4274 MASASLLLTLSTLSLLLSPSFSASSRKELREKEGLLLLKKENASSHYMLGLGHSVNPNSIDPTRVVQISWQPRVFLYREFLSAKECDYLISLAYDLNEKSFDAANGRLASETSLDIEDDIVAKIEERISLWTFLPKENSKPLQVKHYELEQDGQNLDYFTNKTKLESNGPLMATVILYLSNSTQGGQILFPESEPKSSGMSDCGESNKFLQPVKGNAVLFFSLHLSATHDKRSIHSRCPILKGDMWSAIKYLYAKPIGESKVPTVSDGGDCIDEDDNCAAWAAMGECQRNPVFMIGSQDYYGTCRKSCHLC 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g04317 311 Pfam 2OG-Fe(II) oxygenase superfamily 143 252 IPR044862 -
Arst5g04317 311 Gene3D q2cbj1_9rhob like domain 58 253 - -
Arst5g04317 311 SMART p4hc 72 253 IPR006620 GO:0005506|GO:0016705|GO:0031418
Arst5g04317 311 ProSiteProfiles ShKT domain profile. 271 311 IPR003582 -
Arst5g04317 311 FunFam Probable prolyl 4-hydroxylase 12 64 253 - -
Arst5g04317 311 SMART ShkT_1 270 311 IPR003582 -
Arst5g04317 311 Pfam ShK domain-like 271 311 IPR003582 -
Arst5g04317 311 PANTHER PROLYL 4-HYDROXYLASE ALPHA SUBUNIT 46 251 IPR045054 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g04317 Arst-Chr5 105039568 105042202 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g04317 K00472 - gmx:100775928 384.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g04317 5 105039568 105042202 Arst5g04317 5 105039568 105042202 ECH