Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g04257 ATGGAAGACCCCAGCTCCGGCGACTGTTTGCCACAAGGTTGGACTGTGGAAGTTAAAGTCAGAAAGAATGGTAGGAGAGACAAGTATTACTTTTCACCCTCGAGCGGACTAAAATTCAGTTCCAAGGTAGAGGTTTTTCGGCATCTCGAAAATGCTCGGAACAAAGTCGGCATTCGGAGAGTTGCGGACAATTACTACATAGATCCTGCAAGCGGCTATGTGTTCCGCTCGCTAAGAGACGTTGATCGTTATCTTGAATCTGGGGAAATAGGAAGGAACGCGTTCAAGCCGAAAGACAACGGCGATACAGAGTTAAAAGCTGACAAGTTCTCTCCAGTATCGACCACAAAACCAACTGTATCTGTTAGCATGGGTTTGAGCTCAGATTCAGACAGGATATCCAATGATCAACAGGATCAAAAGCCTGTGTGTTCAGCAGAATATGCATCTACACCAATCTCTGAAAATACTTCTGCTCAGTGCACGATGGGGACAAAATCGACCACCTTAGGCTCGGATCAGATAGAAGGGAAGGCTAGTGAAGAAGATTCTCAAGCAAAGCAACTTCCCCAAAATGAACAAATGGGAAATGAAAAATCTCAAAAGCGACAAAGGCGTAAAAAGGAGATCAATCTTCCTCGCCGTTCCTCAAAGCGCCTTGCTGGAATTCAGCTTGATCCAGTTCCAGAACTTGTAACAAGAAGCCGAGCACGCCGAGCTGCAGTTAAACAATCAGGCCAGGGAGAAACCATCAGAAATGAGGATAAATCCTCTAACAGCTTGCCTAATGCCGCAGCGAAAAGGATGAATGTGCCTGATGGTGGATCAGAAACAAAGTGCAAATCTGAGAGTGCAGCAAACATGCTACAGTCAACTAAGTTCTCTACTCCAGAAAGGCTTCCCAACAAGACTACACAAGAGGATGGAAGCAACAAGGATCAAGAATGCTTCTCATTTTGGCCTCAAGAGAACAATGCTACTATGAAAGATCATGTGCTCGATTACTCCCATGAGTTTCCTCTTAAAGAACTGCTGCAGGACCCATGCATTGCATTTGCAATACAAACTCTCACCGGCGAAACATTCGAAATGCAAGTATCCGGCGAATCAAGTGAGCATTCTGAAGCTCTTACTGCAAATATGGGTGGTGATGACAAGGGAGGGTGCAATGTGTTCTCACATCCAGAAAACTATGCTATTATACCACAACAACATGCTGGTGCAGCCGAAACAGCCATCAAGACTAATGAAAACCAAACAGGATCATCATCTTCTGAAAAGGAACCTGATGTTTCATGGATGGATCCATGCATTGAATTTGCAATCAAAACGCTCACTGGCTCTATCCCGTTAGATTCAGAGCAGAATCCTAAGAACTGCATTCAACAGCAGCTTTGCTCATCAAACACAAATCCCAGCGAAATGGCCTATAAACAGGAACCAATGTTTAAAGAGTCTTTTGTGGATCCAACAGCATCATCAACACACAAGAAATGTTGA 1500 0.4433 MEDPSSGDCLPQGWTVEVKVRKNGRRDKYYFSPSSGLKFSSKVEVFRHLENARNKVGIRRVADNYYIDPASGYVFRSLRDVDRYLESGEIGRNAFKPKDNGDTELKADKFSPVSTTKPTVSVSMGLSSDSDRISNDQQDQKPVCSAEYASTPISENTSAQCTMGTKSTTLGSDQIEGKASEEDSQAKQLPQNEQMGNEKSQKRQRRKKEINLPRRSSKRLAGIQLDPVPELVTRSRARRAAVKQSGQGETIRNEDKSSNSLPNAAAKRMNVPDGGSETKCKSESAANMLQSTKFSTPERLPNKTTQEDGSNKDQECFSFWPQENNATMKDHVLDYSHEFPLKELLQDPCIAFAIQTLTGETFEMQVSGESSEHSEALTANMGGDDKGGCNVFSHPENYAIIPQQHAGAAETAIKTNENQTGSSSSEKEPDVSWMDPCIEFAIKTLTGSIPLDSEQNPKNCIQQQLCSSNTNPSEMAYKQEPMFKESFVDPTASSTHKKC 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g04257 499 MobiDBLite consensus disorder prediction 246 265 - -
Arst5g04257 499 Pfam Methyl-CpG binding domain 9 54 IPR001739 GO:0003677
Arst5g04257 499 PANTHER OS04G0193200 PROTEIN 1 49 IPR038945 -
Arst5g04257 499 CDD MBD 8 50 - -
Arst5g04257 499 MobiDBLite consensus disorder prediction 92 314 - -
Arst5g04257 499 SMART TAM_2 2 69 IPR001739 GO:0003677
Arst5g04257 499 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 1 72 IPR001739 GO:0003677
Arst5g04257 499 SUPERFAMILY DNA-binding domain 9 53 IPR016177 GO:0003677
Arst5g04257 499 MobiDBLite consensus disorder prediction 280 304 - -
Arst5g04257 499 MobiDBLite consensus disorder prediction 109 175 - -
Arst5g04257 499 MobiDBLite consensus disorder prediction 92 106 - -
Arst5g04257 499 SUPERFAMILY DNA-binding domain 61 92 IPR016177 GO:0003677
Arst5g04257 499 Gene3D - 57 143 - -
Arst5g04257 499 Gene3D - 1 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g04257 Arst-Chr5 104549670 104553964 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g04257 - - aip:107644820 951.814
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g04257 5 104549670 104553964 Arst5g04257 5 104549670 104553964 ECH