Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g04245 ATGCGAACCTTTATCGTACACAGCTCCAAGCTCATCAAAAGCAAGATAAAAAATATCCCTATGATTCAGCATCAGCATCAGCATCACCATCACCATCATCCGAATTTCAATCCCACGCGAGCAATGTCGCAATCCACCTCGATCCCGAAGAAAATGCAGAGGGTTCGCGACCACGGCTACGACAACTACATGGAAGTCGAGAAGAAAACTCGGAAGGTCCTCAAGGTCCAGAACATCATCCTCAACGAGCACAACCAATCGCTCCCAATCTCGCGCCTCGAAACCCTAGCGCACCGCATAGGCTTCACGCGCAACACAGTCGGTGCTTTCATCCTTAAGTTCCCTCACGTCTTCGAAATCTTCGAGCACCCCGTGCAGCGCGTGCTCTTCTGCCGCCTCACGCGCCAGGCAATCCTCCAAATCAAGCAGGAGAATGAAGCATTGCTCGCTCAGGTTCCACGCGCCGTCACGTGCCTCCGCAAGCTTCTCATGATGTCGAACACGCAGCGGCTTCGCCTCGAGCACGTGAGGATCGCACGCTCCGCTCTAGGGTTACCGGACGACTTCGAATTCTCGGTGGTTTTAAGGTATCCTCAATTTTTTCGCTTAGTTGATGCAAATGAGAGAAGGAACAAGTACATTGAGCTTGTAGAAAGAGAACCTAGTTTAGCAGTCTGTGCAATTGAGAATGTTAGAGAGAGAATTTACAGGGAGAGAGGTGGTGATGCTGAAGATGTTAGGTTCTCATTTCTAATTGATTTTCCACCAGGTTTTAAGATTGGGAAGTATTTTAAGATTGCAATGTGGAAGTGGCAGAGGTTACCTTATTGGTCCCCTTATGAGGATGTTTCTGGCTTTGATTTGAGGTCGATTGAGGCGCAAAAGAGGATGGAGAAGAGGGCTGTTGCCTCAATCCACGAGTTGTTGTCATTGACCGTGGAGAAGAAGATTACCTTGGAGAGGATCGCACACTTCCGGCAGGCGATGAACCTGCCGAATAAGTTGAAGGATTTCCTTCTCCAGCACCAGGGGATTTTCTACGTGTCGACAAGGGGGAACCAGGGGAAGCTCCACACGGTTTTCCTGCGAGAGGCTTATAGGAAGGGTGAGTTGATTGAGCCAAATGATCTGTATTTGGCGCGGAGGAAGCTGGCTGAGTTGGTCTTGTTGAGCCCCCGGAAGGCGAGGATTGACAGGGAATTGGTTGGATACAGGAGAAGCAGGTTGGATGATGAGATGGGGCAGATAACAAGGGTAGCTGTGGAGGATGCCTATGAGGACTTCAAGGGTGAAGATGTAATGGATCAGGATAAGGATGAAGAGGGAAATTTGACCTCGGACATAGGTTCAGATGTTGATTCGGATGTTGGAGATGAAGACAATAGTTTTGATGAAGATAGTGTATCAAGGCAAGAAACATCATAA 1425 0.4884 MRTFIVHSSKLIKSKIKNIPMIQHQHQHHHHHHPNFNPTRAMSQSTSIPKKMQRVRDHGYDNYMEVEKKTRKVLKVQNIILNEHNQSLPISRLETLAHRIGFTRNTVGAFILKFPHVFEIFEHPVQRVLFCRLTRQAILQIKQENEALLAQVPRAVTCLRKLLMMSNTQRLRLEHVRIARSALGLPDDFEFSVVLRYPQFFRLVDANERRNKYIELVEREPSLAVCAIENVRERIYRERGGDAEDVRFSFLIDFPPGFKIGKYFKIAMWKWQRLPYWSPYEDVSGFDLRSIEAQKRMEKRAVASIHELLSLTVEKKITLERIAHFRQAMNLPNKLKDFLLQHQGIFYVSTRGNQGKLHTVFLREAYRKGELIEPNDLYLARRKLAELVLLSPRKARIDRELVGYRRSRLDDEMGQITRVAVEDAYEDFKGEDVMDQDKDEEGNLTSDIGSDVDSDVGDEDNSFDEDSVSRQETS 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g04245 474 MobiDBLite consensus disorder prediction 24 43 - -
Arst5g04245 474 MobiDBLite consensus disorder prediction 428 474 - -
Arst5g04245 474 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 36 422 IPR045040 GO:0003723
Arst5g04245 474 MobiDBLite consensus disorder prediction 428 445 - -
Arst5g04245 474 Pfam Plant organelle RNA recognition domain 55 391 IPR021099 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g04245 Arst-Chr5 104455998 104458183 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g04245 - - adu:107491171 910.983
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g04245 5 104455998 104458183 Arst5g04245 5 104455998 104458183 ECH