Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g04190 ATGTGTCAGGTAACAACATCTCATGATCTCAACTCTCCAAACATGAACACCAACACATTGACACTACCATTGATCTCCAAAGGAGCAGCAGAAGAAGAAGAATCTCAATCTGAATCAGAATCAGATAATAGTAACATCTCAGAGTCATTAAAGGAATTAATATCAATATCAAAGATAGCATTTCCAATGATACTGACAGGGCTATTACTGTATTGCCGTTCAATGATCTCCATGCTGTTCTTAGGACAACTTGGGGAGCTAGCCTTAGCAGGAGGCTCACTAGCACTGGGCTTCGCCAACATCACCGGCTACTCGATCCTCTCCGGCCTAGCCGTGGGAATGGAACCCATCTGTGGACAAGCCTTTGGTGCCAAGAAATTCAGGCTTTTAGGCCTATCCTTACAAAGAACCATTCTCTTGCTTCTCTTGACTTCAATCCCAATATCACTCCTCTGGCTCCACATGAAGCAAATCCTTCTTCTTTGTAACCAAGATGAGGCCATAGCCATAGAAGCACAATCATATCTTCTCTTCTCAATCCCTGACCTCATAGCACAGTCTTTTCTTCACCCTTTGAGGATTTATCTCAGAACACAGTCAATTACTCTGCCTCTAACACTCTGTGCCACTTTCTCTATTCTCCTCCACATACCAATCAACTATCTCCTTGTTTCTCACCTCAACCTTGGAATCAAGGGCGTTGCGCTTAGTGGGGTGTGGACAAATTTCAACCTTGTTGCTTCTTTGCTTCTCTATATAGTCCTCTCAGGAACTCACTCCAAGACATGGGGTGGATTCTCTTCTGAGTGCTTCACAAAATGGAAGCAGCTCTTGAATTTGGCAATCCCAAGCTGCATTTCTGTGTGCCTTGAATGGTGGTGGTACGAGATCATGATCTTGCTGTGTGGTCTGTTATTGAATCCAAGAGCAACCGTAGCTTCAATGGGGATTCTCATCCAAACAACATCGCTGCTCTACATTTTTCCATCTTCTCTGAGCTTCAGTGTTTCCACAAGGGTAGGGAACAAGCTAGGAGCACAAGAGCCTTCAAAGGCGAAACTTTCGGCCATTGTAGGACTCTCTTGCAGCTTCATTTCCGGTGTATCAGCACTGGCTTTTGCTCTAACTGTTAGGAACATGTGGGCAAGCATGTTCACAAGGGACAAAGAGATTATAGCATTGACATCAATGGTGTTACCAATTATAGGTCTTTGTGAACTTGGTAACTGTCCTCAAACCACAGGTTGTGGTGTTCTTAGAGGGACAGCAAGGCCTAAAACAGGTGCTAACATCAACTTGGGTTGCTTCTATCTTGTGGGAATGCCTGTGGCAATTTGGTTAGGCTTCTTTGCTGGCTTTGATTTTCAAGGTTTGTGGCTTGGCCTACTTGCTGCTCAAGGCTCTTGTGCTGTGTCCATGTTGGTTGTTCTTCTTAGAACTGATTGGGATTTAGAAGCTCAAAGGGCTAAGAAATTAACAGCTTCATCACCATCTGTTGGAGGAGTTTGCAATGATGATGATGATAAGAACAAAGATGTTTATCATCATCATTATGATGCAGACAACAAGTTACCCAAACCTCAAAGCAAGGAAGATTCTTTCTCATCTAATAATTCAGATGAACACCAACACTCTTATTGGGTTTAA 1647 0.4335 MCQVTTSHDLNSPNMNTNTLTLPLISKGAAEEEESQSESESDNSNISESLKELISISKIAFPMILTGLLLYCRSMISMLFLGQLGELALAGGSLALGFANITGYSILSGLAVGMEPICGQAFGAKKFRLLGLSLQRTILLLLLTSIPISLLWLHMKQILLLCNQDEAIAIEAQSYLLFSIPDLIAQSFLHPLRIYLRTQSITLPLTLCATFSILLHIPINYLLVSHLNLGIKGVALSGVWTNFNLVASLLLYIVLSGTHSKTWGGFSSECFTKWKQLLNLAIPSCISVCLEWWWYEIMILLCGLLLNPRATVASMGILIQTTSLLYIFPSSLSFSVSTRVGNKLGAQEPSKAKLSAIVGLSCSFISGVSALAFALTVRNMWASMFTRDKEIIALTSMVLPIIGLCELGNCPQTTGCGVLRGTARPKTGANINLGCFYLVGMPVAIWLGFFAGFDFQGLWLGLLAAQGSCAVSMLVVLLRTDWDLEAQRAKKLTASSPSVGGVCNDDDDKNKDVYHHHYDADNKLPKPQSKEDSFSSNNSDEHQHSYWV 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g04190 548 CDD MATE_eukaryotic 52 488 IPR045069 GO:0042910|GO:1990961
Arst5g04190 548 Pfam MatE 62 222 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Arst5g04190 548 Pfam MatE 283 445 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Arst5g04190 548 PANTHER MULTIDRUG RESISTANCE PROTEIN 49 482 - -
Arst5g04190 548 NCBIfam MATE family efflux transporter 62 459 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Arst5g04190 548 MobiDBLite consensus disorder prediction 529 548 - -
Arst5g04190 548 MobiDBLite consensus disorder prediction 495 548 - -
Arst5g04190 548 MobiDBLite consensus disorder prediction 504 528 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g04190 Arst-Chr5 104066170 104068346 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g04190 K03327 - gmx:100788027 751.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g04190 5 104066170 104068346 Arst5g04190 5 104066170 104068346 ECH