Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g04157 ATGCAACACTCTGCAAATCAAATGGCCAATTCTTACTCAGGTAATTCCAATCATATCTCAAAAGAAGACGCAAAGGAAACAAGTTCGCTGGTTGTTTCCTTTGGGGAACTGCTGATAGACTTTGTGCCAACAGTGGGAGGAGTGTCGCTGGCCGAAGCACCGGCTTTTCAGAAAGCTCCTGGTGGAGCTCCTGCCAATGTAGCTGTTGGTATATCTAGACTTGGAGGTTCATCAGCTTTCGTCGGAAAGGTTGGAGCAGACGAGTTCGGTTACATGTTGGCCAACATATTGAAGGAAAACAATGTTGACATGTCTGGCATGCGGTTTGACCCGAATGCTAGAACTGCATTAGCTTTTGTTACACTTAGAGCTGACGGTGAACGAGAATTCTTGTTTTTCCGGAATCCAAGTGCTGATATGCTTCTTCATGAATCAGAACTTGATATAAATCTCTTAAAGAAGGCTAGAGTCTTCCATTATGGCTCCATCAGCTTGATTGACGAGCCGTGCAAGTCAGCTCATCTTGCTGCTATGAGAATTGCCAGCAATTCTGGTAGTATTCTCTCTTATGATCCAAATTTGAGATTAGCACTATGGCCATCAGCCGAGGCTGCTCGCAAGGGCATAATGAGTATTTGGGATCAAGCCGATGTCATAAAGATAAGTGAGGAAGAGATTACATTTTTGACGGGTGGTGATGATCCTTATGATGATAATGTTGTATTGAAGAAACTTTTTCATCCAAATCTCAAACTTCTAATTGTTACTGAAGGCTCATCTGGTTGTAGATATTACACCAAGGAATTCAGGGGCAAAGTTGGAGGTGTTAAAGTCAAACCTGTTGACACAACTGGTGCCGGTGATGCATTTGTCGGTGGATTTCTCTACAACTTGGCTTCTGACCCAAGTATTCTTCAGGATGAGAAACGGCTGCGAAAAGCTCTATATTTCGCAAATGTATGCGGCGCCATCACTGTAACTGAGAGAGGTGCCATTCCTGCAATGCCTACAAAGGAAGCTATCTTGCAATTCTTACTAGAATCTGCTTCAATATAG 1056 0.4328 MQHSANQMANSYSGNSNHISKEDAKETSSLVVSFGELLIDFVPTVGGVSLAEAPAFQKAPGGAPANVAVGISRLGGSSAFVGKVGADEFGYMLANILKENNVDMSGMRFDPNARTALAFVTLRADGEREFLFFRNPSADMLLHESELDINLLKKARVFHYGSISLIDEPCKSAHLAAMRIASNSGSILSYDPNLRLALWPSAEAARKGIMSIWDQADVIKISEEEITFLTGGDDPYDDNVVLKKLFHPNLKLLIVTEGSSGCRYYTKEFRGKVGGVKVKPVDTTGAGDAFVGGFLYNLASDPSILQDEKRLRKALYFANVCGAITVTERGAIPAMPTKEAILQFLLESASI 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g04157 351 Gene3D - 27 350 IPR029056 -
Arst5g04157 351 PANTHER HEXOKINASE FAMILY MEMBER 30 345 - -
Arst5g04157 351 MobiDBLite consensus disorder prediction 1 20 - -
Arst5g04157 351 FunFam Probable fructokinase-2 28 349 - -
Arst5g04157 351 CDD bac_FRK 30 332 - -
Arst5g04157 351 MobiDBLite consensus disorder prediction 1 18 - -
Arst5g04157 351 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 282 295 IPR002173 GO:0016301
Arst5g04157 351 Pfam pfkB family carbohydrate kinase 30 337 IPR011611 -
Arst5g04157 351 SUPERFAMILY Ribokinase-like 31 345 IPR029056 -
Arst5g04157 351 PRINTS Ribokinase signature 253 264 IPR002139 GO:0016301
Arst5g04157 351 PRINTS Ribokinase signature 56 75 IPR002139 GO:0016301
Arst5g04157 351 PRINTS Ribokinase signature 211 226 IPR002139 GO:0016301
Arst5g04157 351 ProSitePatterns pfkB family of carbohydrate kinases signature 1. 61 85 IPR002173 GO:0016301
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g04157 Arst-Chr5 103755464 103759300 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g04157 K00847 - gmx:100778752 570.852
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g04157 5 103755464 103759300 Arst9g03192 9 109421190 109424023 ECH
Arst5g04157 5 103755464 103759300 Arst5g04157 5 103755464 103759300 ECH
Arst5g04157 5 103755464 103759300 Arst9g03192 9 109421190 109424023 PCT