Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g03521 ATGGCCGATCAGAACCAGAAACCTGAGATCTTCGAGCTCAACAATGGCACCATGGACGTCAAAGTTACCAACCTCGGATGCACCATCATCTCCCTCTCCGTTCCCGGCAAAGATGGGGCGTTGTCTGACGTTGTTCTTGGCCTCGATTCCGTTGAATCATATCAGAAAGGTCTTGCTCCTTATTTCGGCTGCATTGTGGGTCGCGTAGCAAACCGAATTAAGGAGGGAAAGTTTACACTTGATGGGGTTGAGTACTCTTTGCCTCTCAACAAACCCCCAAACAGTCTTCATGGAGGAAATATAGGGTTCGATAAGAAGGTATGGGAGGTTGTTGAATATAAAAAGGGTGAAACCCCATCAATTACTTTTAAATATCACAGTCATGATGGAGAGGAAGGTTATCCTGGGGATATTACCGTTACTGCAACTTACACGCTCATTTCGGGAACAACTATGAGGCTTGACATGGAAGGAGTACCAAAGGACAAGCCCACCATAATTAACTTAGCTCAGCATACCTATTGGAACTTGGCTGGCCACAACTCAGGAGACGTCCTTAACCATTCCATTCAGATATGGGGGAATCATGTAACCCCAGTCGATCAGAACACTGTGCCAACCGGCGAAATAATGCCGGTGAAGGGCACCCCGTTTGATTTTACCACTGAGAGTAGAATAGGCAACACCATTGGTCAGGTTGGAATGGGATACGACCACAACTATGTGCTTGATTGTGGTGACGAGAAAGCAGGTTTAAAACATGCTGCTAAAGTGAGAGATCCCTCAAGTTCAAGAGTGCTAAACTTGTGGACAAATGCCCCTGGCATGCAGTTTTACACGGCAAACTATGTCAATGGCGTTAACGGAAAAGGAGGCGCCGTATATGGAAAGCATGCAGGGCTGTGTTTGGAGACTCAGGGATTCCCTAATGCCATAAACCAGCCAAATTTCCCATCTGTTGTGGTTAGACCTGGTGAGAAGTACCAACATTCAATGTTGTTTGAGTTTTCAATCGAGTAA 1020 0.4608 MADQNQKPEIFELNNGTMDVKVTNLGCTIISLSVPGKDGALSDVVLGLDSVESYQKGLAPYFGCIVGRVANRIKEGKFTLDGVEYSLPLNKPPNSLHGGNIGFDKKVWEVVEYKKGETPSITFKYHSHDGEEGYPGDITVTATYTLISGTTMRLDMEGVPKDKPTIINLAQHTYWNLAGHNSGDVLNHSIQIWGNHVTPVDQNTVPTGEIMPVKGTPFDFTTESRIGNTIGQVGMGYDHNYVLDCGDEKAGLKHAAKVRDPSSSRVLNLWTNAPGMQFYTANYVNGVNGKGGAVYGKHAGLCLETQGFPNAINQPNFPSVVVRPGEKYQHSMLFEFSIE 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g03521 339 PIRSF GALM 1 339 IPR015443 GO:0016853|GO:0019318
Arst5g03521 339 CDD galactose_mutarotase_like 14 336 IPR047215 GO:0016853
Arst5g03521 339 PANTHER ALDOSE-1-EPIMERASE 7 338 - -
Arst5g03521 339 FunFam Aldose 1-epimerase 2 338 - -
Arst5g03521 339 SUPERFAMILY Galactose mutarotase-like 4 337 IPR011013 GO:0003824|GO:0005975|GO:0030246
Arst5g03521 339 Pfam Aldose 1-epimerase 11 334 IPR008183 GO:0005975|GO:0016853
Arst5g03521 339 Gene3D - 1 339 IPR014718 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g03521 Arst-Chr5 94252040 94254616 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g03521 3 338 Miscellaneous Gene Families AT5G15140 48.071 1.23e-108 324
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g03521 K01785 - gmx:100776238 641.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g03521 5 94252040 94254616 Arst5g03521 5 94252040 94254616 ECH