Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g03451 ATGGAGAGAGAAGAACACCAAAAGGCGTCTCTCCATTCTCCTTTGATTCAAGATTGTGCAGAGCAGAACAAAGCAAAATCAATAGAAAAGAGTGAGGTAGTTGAAGAAGTGAAGAAGCAGCTATGGCTATCAGGGCCTTTGGTATCTGTGAGCTTGCTCAATTATTGCCTGCAAGTCATATCTGTCATGTTTGTTGGTCATCTCGGCGAGTTGGCGCTTTCCGGCGCTTCAATGGCCACTTCTTTTGCCTCTGTTACAGGTTTTAGCTTATTGGTGGGAATGGCTAGTGCCTTGGACACCTTATGTGGGCAATCATATGGAGCAAAACAGCACAGAATGTTAGGCATACACATGCAGAGAGCAATGCTGATTCTCATGATTGTCAGCGTTCCGCTCGCGGTTATTTGGATCAACACAAGATCAATTCTGATGTTTCTTGGCCAAGATCCTGAGATTTCTACAGAAGCAGGAAGCTATGCTCAGTTAATGGTTCCAAGCCTTTTTGCTTATGGCCTTCTTCAGTGCCTAAACAGATTCTTGCAAACACAGAACATAGTGTTTCCAATGGTGTTCTGCTCTGGAATCACTACTTTGCTACATGTCCTTATTTGTTGGATTATGGTGTTCAAATCTGGATTGGGGAGTAGAGGAGCTGCCATAGCAAATTCTATATCTTATTGGATCAATGTTTTATTGCTCTCACTTTATGTCAAGCTTTCTCCTTCTTGTGCAAGGACTTGGTCAGGGTTTTCTAAAGAGGCATTTCAAAATATTCCCTCATTTCTTAGGCTTGCAATTCCTTCAGCTGTTATGGTTTGCTTGGAAATGTGGTCATTTGAAATGATGGTTCTCCTTTCCGGTCTTCTTCCAAATCCACAATTGGAGACATCAGTTCTTTCTATTTGCTTGAATACAGCAGCAGCAGTTTGGATGATACCCTTTGGACTCAGTGGAGCTGTAAGCACTCGCGTCTCGAATGAACTTGGAGCTGGTAATCCCAAGACTGCACGCTTAGCAGTGTGTGTTGTGTTAGTAATGGCCATTATTGAGGGACTCATAGTTGGATTAGTGCTAATATTAATTCGCCATGTTTGGGGCTATGCGTATAGTAACGAAGGCGAAGTGGTCGATTATGTTGCAGTTATGCTGCCAATTCTTGCAACATCCAACTTTCTTGATGGACTCCAATGTGTTCTTTCAGGCACTGCTAGAGGATGTGGTTGGCAGAAAATTGGCGCATATGTGAATCTGGGATCATACTACTTAGTTGGGATTCCATCAGCTATTCTCTTGGCTTTTACATTTCATATTGGCGGCAAGGGGTTATGGCTAGGGATCATATGTGCACTAATTGTTCAAGTACTTTCTCTACTGACCATTACTATAAGAACTGATTGGGACCAAGAGGCAAAGAAGGCTACAGATAGAGTCTTTGATTCAATCACACCAGACAGTATAGTCTCATGA 1467 0.426 MEREEHQKASLHSPLIQDCAEQNKAKSIEKSEVVEEVKKQLWLSGPLVSVSLLNYCLQVISVMFVGHLGELALSGASMATSFASVTGFSLLVGMASALDTLCGQSYGAKQHRMLGIHMQRAMLILMIVSVPLAVIWINTRSILMFLGQDPEISTEAGSYAQLMVPSLFAYGLLQCLNRFLQTQNIVFPMVFCSGITTLLHVLICWIMVFKSGLGSRGAAIANSISYWINVLLLSLYVKLSPSCARTWSGFSKEAFQNIPSFLRLAIPSAVMVCLEMWSFEMMVLLSGLLPNPQLETSVLSICLNTAAAVWMIPFGLSGAVSTRVSNELGAGNPKTARLAVCVVLVMAIIEGLIVGLVLILIRHVWGYAYSNEGEVVDYVAVMLPILATSNFLDGLQCVLSGTARGCGWQKIGAYVNLGSYYLVGIPSAILLAFTFHIGGKGLWLGIICALIVQVLSLLTITIRTDWDQEAKKATDRVFDSITPDSIVS 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g03451 488 CDD MATE_eukaryotic 36 472 IPR045069 GO:0042910|GO:1990961
Arst5g03451 488 Pfam MatE 267 429 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Arst5g03451 488 Pfam MatE 46 206 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Arst5g03451 488 NCBIfam MATE family efflux transporter 46 443 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Arst5g03451 488 PANTHER MULTIDRUG RESISTANCE PROTEIN 30 466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g03451 Arst-Chr5 93354575 93358990 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g03451 K03327 - gmx:100815319 771.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst9g03591 9 112218773 112222118 Arst5g03451 5 93354575 93358990 ECH
Arst9g03592 9 112222752 112225861 Arst5g03451 5 93354575 93358990 ECH
Arst5g03451 5 93354575 93358990 Arst5g03451 5 93354575 93358990 ECH
Arst5g03451 5 93354575 93358990 Arst3g05316 3 128233608 128237585 PCT