Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g03328 ATGGCGTTCGCAGCCACCACGACGGCAACTACTAACCTCTCTGAATTGCACCTCAAAACTTGTTCACCTTCATCACTCTCACTCACTTCTCCTCATTCTTCATCTTCCTCCTCAACGCTCTTCTTCTTTCGCTCTAAACCCCCATTCCGCACTCTTACACTCACACCCTTCTCTTCTCTTAGAACCTCACAACAACATACAAAACAGAATAACCGTTCTTCTTCCACAACAAAACCTAACACCAACACCAGCACCAGCACCAGCAACCCTTCTGCCCCATGGCTCGCAAAAACCCCTCCCCCCAATAATTCCTCCAAAAGGGTCACCGAATCTCACACCAACGACCCACTTCATGATACAACGGAAAATCGTTACTTTGACGGTGATAAGGGGCAAAACGCGGTTGAGAGGATCGTTCTTCGGTTGAGGAACCTGGGATTGGCTTCAGATGATGATGATGATTATGAAGAAGAAGAAGGAAAAGAAGAGGTCTCAATTGGTGGTGCTGGTGATGATTTTCCGGTGACCGGAGAAGAGAGGCTTGGTGAGCTTCTGAGAAGGGAATGGGTTAGGCCTGATGCTATTGTACGTGAAGATGATGGTGTTGGTGATGATGAGATGGTCTTTTTGCCATGGCAGAGAGAAGTGGAAGAGAGAGAGATGGGTGCTGCTAAAGAGGGAGGGGAGAAAGGCATGAGGGATAAGAGGAGGGTAAAGGCTCCAACTTTGGCGGAGCTTACGCTTGAGGACGAGGTTTTGAGGAGGTTAAGGAGGGAAGGAATGCGTACTAGGGAGAGGGTTAATGTCCCTAAAGCTGGGCTCACCAAGGAGGTTATGGAGAAGATTCACGAGAGGTGGAGGAAGGAGGAGCTTGTGAGGCTCAAGTTTCATGAGGACCTTGCAAGGGACATGAGGACTGCTCATGAGATTGTTGAGCGCCGAACAGGAGGGTTGGTCACATGGAGGGCAGGTAGTGTTATGATGGTTTATCGTGGTGCTAATTACCAAGGGCCTTCATCTGCGGGTCAACACAATGCAAAAGAAGGTGATGCTTTTTTTGTACCGGATGTCTCCCCGAGAACAAAAGACAGTGATGCAGCCTCATCATCGGAGAAGAGTGAGCCAATTGTGTGGAATCGAGGACAGCCTGAAAACATGACAGAGGAGGAAGCGGAGTACAATGCCCTGCTTGATAGTTTGGGTCCTCGTTTCATTGAATGGTGGGGTACAGGAGTACTTCCTGTTGATGCTGATTCACTCCCCCCTATAGTTCCAGGTTACAAAACACCCTTTAGGCTTCTTCCTACTGGAATGCGTTCTCGACTAACAAATGCGGAAATGACCAATTTAAGGAAACTTGCCAAGACACTTCCTTGTCATTTTGCCTTAGGGAGAAATAGGCGTCACCAAGGCCTAGCTTGTGCTATTCTTAAGCTTTGGGAGAAAAGTTTAATTGCAAAGATTGCTGTAAAACGTGGTATCCAGAACACAAACAATGAACTGATGGCTGAGGAGATAAAGACATTGACCGGGGGTACCTTGCTGCTAAGGAATAAATATTACATTGTTATATATCGTGGGAAGGACTTTGTCCCGACAGCTGTAGCTACAGTCCTAGCTGAAAGACAGGAAATGACCAAACAGGTACAAGATGTTGAAGACAAGTTCCGGTCTGGTGTTCTTGATGCTACTCCATCAGGGAAAGATGAATCAGCAACACCACGAGCAGGATCTTTAGCAGAGTTCTATGAAGCTCAGGCACGCTGGGGAAGGGATATATCTACTGAAGAACGGGAGAGGATGATGGAGGAAGCTGCCAAATCCAAGCAAGTCAGGCTAGTCAGACATATCGAACATAAATTAGCTACCGCTGAGGCAAAAAAACTTAGGGCAGAAAGGCTGTTAGCAAAAATAGAAGCATCTATGGTTCCAGCTGGTCCTGATTATGACCAGGAGACAATCACAGATGAAGAACGTGTTGTGTTCCGTCGGATTGGTTTAAGAATGAAGGCATATTTACCACTTGGTATTCGTGGTGTTTTTGATGGTGTCGTTGAGAACATGCATTTGCATTGGAAACATCGGGAGCTTGTAAAATTGATATCAAAACAGAAGACCCTTGCTTTTGTTGAAGATACAGCAAGGTTACTGGAATTTGAAAGTGGTGGAATCCTAGTGGCAATAGAGAGAGTTCCCAAAGGATTTGCTCTTATTTACTATCGTGGAAAGAATTATAAGAGGCCCATCATTCTGAGGCCTAAAAACTTACTGACAAAGCAAAAAGCATTGAAGCGATCAGTGGCTATGCAACGGCATGAGGCTCTTAGTCAGCATATAACTGAGTTGGAGAAAACCATAGAACAAATGAAAACAGAACTTGGAATGCCTCAAGATCTGGAAGATGAAGATATGCCAAACATAGAGGACCATAACCAAATAGACAATAGCTCGGAATTCAGCCAAAGCGAAGATGAAAATTTTGATGGTTTGGATGATTATGATGACAATGAACATGAAGATGATGATTCTGATGAGGAGCAAGACATTGATTGGGAAGATGAGGATGACTCTGCGTTTTCTAAATTAGAAAATGGTGAACATCCTTGA 2607 0.4522 MAFAATTTATTNLSELHLKTCSPSSLSLTSPHSSSSSSTLFFFRSKPPFRTLTLTPFSSLRTSQQHTKQNNRSSSTTKPNTNTSTSTSNPSAPWLAKTPPPNNSSKRVTESHTNDPLHDTTENRYFDGDKGQNAVERIVLRLRNLGLASDDDDDYEEEEGKEEVSIGGAGDDFPVTGEERLGELLRREWVRPDAIVREDDGVGDDEMVFLPWQREVEEREMGAAKEGGEKGMRDKRRVKAPTLAELTLEDEVLRRLRREGMRTRERVNVPKAGLTKEVMEKIHERWRKEELVRLKFHEDLARDMRTAHEIVERRTGGLVTWRAGSVMMVYRGANYQGPSSAGQHNAKEGDAFFVPDVSPRTKDSDAASSSEKSEPIVWNRGQPENMTEEEAEYNALLDSLGPRFIEWWGTGVLPVDADSLPPIVPGYKTPFRLLPTGMRSRLTNAEMTNLRKLAKTLPCHFALGRNRRHQGLACAILKLWEKSLIAKIAVKRGIQNTNNELMAEEIKTLTGGTLLLRNKYYIVIYRGKDFVPTAVATVLAERQEMTKQVQDVEDKFRSGVLDATPSGKDESATPRAGSLAEFYEAQARWGRDISTEERERMMEEAAKSKQVRLVRHIEHKLATAEAKKLRAERLLAKIEASMVPAGPDYDQETITDEERVVFRRIGLRMKAYLPLGIRGVFDGVVENMHLHWKHRELVKLISKQKTLAFVEDTARLLEFESGGILVAIERVPKGFALIYYRGKNYKRPIILRPKNLLTKQKALKRSVAMQRHEALSQHITELEKTIEQMKTELGMPQDLEDEDMPNIEDHNQIDNSSEFSQSEDENFDGLDDYDDNEHEDDDSDEEQDIDWEDEDDSAFSKLENGEHP 868
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g03328 868 ProSiteProfiles CRM domain profile. 440 537 IPR001890 GO:0003723
Arst5g03328 868 MobiDBLite consensus disorder prediction 56 128 - -
Arst5g03328 868 FunFam CRS2-associated factor 1, chloroplastic 441 537 - -
Arst5g03328 868 MobiDBLite consensus disorder prediction 824 857 - -
Arst5g03328 868 SUPERFAMILY YhbY-like 653 751 IPR035920 -
Arst5g03328 868 SMART CRS1_YhbY_2 248 331 IPR001890 GO:0003723
Arst5g03328 868 SMART CRS1_YhbY_2 654 741 IPR001890 GO:0003723
Arst5g03328 868 SMART CRS1_YhbY_2 442 526 IPR001890 GO:0003723
Arst5g03328 868 ProSiteProfiles CRM domain profile. 246 342 IPR001890 GO:0003723
Arst5g03328 868 MobiDBLite consensus disorder prediction 149 175 - -
Arst5g03328 868 MobiDBLite consensus disorder prediction 111 128 - -
Arst5g03328 868 Coils Coil 772 792 - -
Arst5g03328 868 Gene3D - 653 755 IPR035920 -
Arst5g03328 868 Gene3D - 246 346 IPR035920 -
Arst5g03328 868 Gene3D - 441 534 IPR035920 -
Arst5g03328 868 SUPERFAMILY YhbY-like 247 338 IPR035920 -
Arst5g03328 868 SUPERFAMILY YhbY-like 442 533 IPR035920 -
Arst5g03328 868 MobiDBLite consensus disorder prediction 798 868 - -
Arst5g03328 868 MobiDBLite consensus disorder prediction 56 110 - -
Arst5g03328 868 FunFam CRS2-associated factor 1, chloroplastic 247 341 - -
Arst5g03328 868 MobiDBLite consensus disorder prediction 353 384 - -
Arst5g03328 868 Coils Coil 614 641 - -
Arst5g03328 868 PANTHER CRS1 / YHBY (CRM) DOMAIN-CONTAINING PROTEIN 26 837 IPR045278 GO:0000375|GO:0003729
Arst5g03328 868 Coils Coil 535 555 - -
Arst5g03328 868 FunFam CRM-domain containing factor CFM3B, chloroplastic 653 755 - -
Arst5g03328 868 Pfam CRS1 / YhbY (CRM) domain 655 730 IPR001890 GO:0003723
Arst5g03328 868 Pfam CRS1 / YhbY (CRM) domain 442 526 IPR001890 GO:0003723
Arst5g03328 868 Pfam CRS1 / YhbY (CRM) domain 249 331 IPR001890 GO:0003723
Arst5g03328 868 ProSiteProfiles CRM domain profile. 652 752 IPR001890 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g03328 Arst-Chr5 91824771 91830681 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g03328 - - ahf:112802226 1519.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g03328 5 91824771 91830681 Arst5g03328 5 91824771 91830681 ECH
Arst5g03328 5 91824771 91830681 Arst5g03328 5 91824771 91830681 PCT