Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g03302 ATGTCTTTCTGGTCTAAATTTATGTTATTTAGAACTTTCATGGGTGCAACTCTTAGCAAAGGGCTTAACAGAGGACTTGGGACTTTGTCAGCTGGAGGACTTGCTTTGGGAATAGGAGAATTAACAAGATTGGGTGGTGACTGGCAAGTTCTTTATACTATTATCAGCATCTTCATTGCAGGATTTTGTGCTACCTATGCTAAACTATACCCGACATTGAAGGCTTATGAATATGGTTTCCGTGTGTTCTTGATCACATTTTGCTACATCATTGTATCCGGATATCGAACTGGAGAGTTTGTTCAGACGTCTATAAACAGGTTTCTGCTCATTGCGATTGGTGCTGCTGTATCTGTTGGAGTAAATGTATGTATATTTCCAATCTGGGCTGGTGAGGATCTGCATAATCTTGTGGGGAAGAATTTCATGGGGGTCGCGAAATCTTTGGAAGGTGTTGTCAATAACTACCTTAATTGTGTTGAGTATGAGAGAATACCCTCAAAAATTCTTACCTACCAAGCTTCTGATGACCCGCTTTACAGCGGCTACAGATCGGCTGTTGAATCTTCGAGCCAAGAGGAAGCACTGTTAGGTTTTGCTGTTTGGGAGCCACCTCATGGTCGCTACAGAATGTTTAAATATCCTTGGCATAATTATGTGAAAGTAGGTGGAGCATTAAGGCATTGTGCGTTTATGGTCATGGCTATGCATGGATGTATACTTTCTGAAATACAGGCTCCACCTGAGAAGAGGCAAGTTTTCCAAAGTGAGCTGAAGAAGGTAGGCGCTGAAGCAGCAAAAGTGCTTCGGGAACTTGGAAACAAAGTTCAAAAGATGGAGAAACTGGGTCAGGACGACATTTTGTTTGAAGTACACGAGGCAGCAGAAGAACTGCAACAGAAGATTGATAAGAAGTCTTTCATCCTTGTAAATTCTGAGAGCTGGGAGATTGGAAACCGGCCAAGACCAAAGGGCGAACAACAAGATTTCTCAAACATGGACGATGAAAGACGTTTCTTGGAGTACAAGTCTCTCAGCGAAGCTGTCCTCGACCTAAGATCAGTTAACGTTCCAAAAAATTGGGATGAACAAACTGCGGCCCAACCACCAGGTTTCGTTGAAGAAAACATATACAAGAAACAGCCTTCCTGGCCTGCTCATATTTCCTTTAAGACAGATGTAGTGTTTAAAGAGGAGGAATCAAGGACATATGAAAGTGCTAGTTCACTGTCTCTAGCAACATTTACATCCCTCTTGATTGAGTTTGTGGCAAGGCTCCAGAACCTTGTGGATTCATTTGAAGAGTTAGGTGAGAAAGCAAACTTTAAGGACCCTCTTGAGCAAGAACATGTGAGAAGTGGTTGCTGGACAAGGATGTTTGATTGTTTCATATCTAAGGATTGA 1404 0.4217 MSFWSKFMLFRTFMGATLSKGLNRGLGTLSAGGLALGIGELTRLGGDWQVLYTIISIFIAGFCATYAKLYPTLKAYEYGFRVFLITFCYIIVSGYRTGEFVQTSINRFLLIAIGAAVSVGVNVCIFPIWAGEDLHNLVGKNFMGVAKSLEGVVNNYLNCVEYERIPSKILTYQASDDPLYSGYRSAVESSSQEEALLGFAVWEPPHGRYRMFKYPWHNYVKVGGALRHCAFMVMAMHGCILSEIQAPPEKRQVFQSELKKVGAEAAKVLRELGNKVQKMEKLGQDDILFEVHEAAEELQQKIDKKSFILVNSESWEIGNRPRPKGEQQDFSNMDDERRFLEYKSLSEAVLDLRSVNVPKNWDEQTAAQPPGFVEENIYKKQPSWPAHISFKTDVVFKEEESRTYESASSLSLATFTSLLIEFVARLQNLVDSFEELGEKANFKDPLEQEHVRSGCWTRMFDCFISKD 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g03302 467 Pfam Aluminium activated malate transporter 10 437 IPR020966 GO:0015743
Arst5g03302 467 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 9 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g03302 Arst-Chr5 91267982 91271521 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g03302 8 445 Miscellaneous Gene Families AT3G18440 62.528 0.0 577
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g03302 K25841 - gmx:100810157 706.057
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g03302 5 91267982 91271521 Arst5g03301 5 91267982 91273152 ECH
Arst5g03302 5 91267982 91271521 Arst5g03302 5 91267982 91271521 ECH
Arst5g03302 5 91267982 91271521 Arst5g03302 5 91267982 91271521 PCT