Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g02617 ATGGCTTCCATTCCCACCCTTTCCTCTTCTTCTATACCTTCAATCTCTCCCAATAATGTTTCAAACCCCACCAACAACAACAATAATCTACACTTCACCTCTCTCTTCGGAACCAGAATCACCATTCATCGCTTCTCTCCAATCCCTCCATTCCCCTCAGTGAGTTGCCGCACCCGTGCCACCACTGCAACGGTGTCCTTTAGTCTTCCCACCACGAAACCCAAGGCGGATACAATTGACAAAACGCCACAGTGGTCGGCGAGGTCTATAAAGTCTTTTGCTATGGCAGAATTGGAAGCCAGGAAGCTGAAGTATCCCAACACAGGAACCGAAGCACTTCTCATGGGGATTTTGGTAGAAGGAACAAGTAAAGCTGCAAAATTCTTGAGAGCCAATGGAATTTCTCTTTTCAAAGTACGGGAAGAAACAGTAGAGCTACTTGGGAAATCTGACCTGTATTTCTTTAGCCCTGAACATCCTCCATTGACCGAACCAGCTCAGAAAGCCCTTGACTGGGCTGTGGATGAGAAATTGAAGTCAGGTGATGGAGGCGAAATAACCGTGACTCATTTACTTCTTGGAGTTTGGGCCCAAGAAGGATCAGCAGGTCGCCAGATCTTGTCCACTTTAGGTTTCAATGATGAAAAAGCCAAAGAACTTGCCAAAGAAATTAATGAAGATGTTGATTTGAGCTTTAAGAAGCAAGCTTGA 711 0.4543 MASIPTLSSSSIPSISPNNVSNPTNNNNNLHFTSLFGTRITIHRFSPIPPFPSVSCRTRATTATVSFSLPTTKPKADTIDKTPQWSARSIKSFAMAELEARKLKYPNTGTEALLMGILVEGTSKAAKFLRANGISLFKVREETVELLGKSDLYFFSPEHPPLTEPAQKALDWAVDEKLKSGDGGEITVTHLLLGVWAQEGSAGRQILSTLGFNDEKAKELAKEINEDVDLSFKKQA 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g02617 236 ProSiteProfiles Clp repeat (R) domain profile. 79 227 IPR004176 -
Arst5g02617 236 SUPERFAMILY Double Clp-N motif 84 224 IPR036628 -
Arst5g02617 236 Gene3D - 84 233 IPR036628 -
Arst5g02617 236 PANTHER ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPT1, CHLOROPLASTIC 9 232 IPR044217 -
Arst5g02617 236 Pfam Clp amino terminal domain, pathogenicity island component 185 222 IPR004176 -
Arst5g02617 236 Pfam Clp amino terminal domain, pathogenicity island component 96 148 IPR004176 -
Arst5g02617 236 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g02617 Arst-Chr5 80428235 80430529 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g02617 - - gmx:100786582 325.479
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g02617 5 80428235 80430529 Arst5g02617 5 80428235 80430529 ECH