Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g02616 ATGAGCTTCGCGGCCTACAAGATGATGCACTGCCCAACCGGCATCGATAACTGTGCCTCCGGTTTCCTCACTCACTCACGCGCCGACTACGTTCCACGCGTCCCTCCTCTTCCCGCCGACGACCTGGACCCTGACTCCGACTGGCCCAACCCCGCTACCCGCCGCGACCTCGGCCCCATTCCCAACCTTATCCTCACTTCTGCCAATGTCCTCGAAGTCTATGCCGTCAGGGTCCACGAGGAATCTGCTAAGGGTCCTCCGGCTGCAGCTGAGTCCAGCCGTGGTGGCGTTTTCGACGGCGTCACCGGGGCCTCACTCGAGCTTGTTTGCCATTACAGGTTACATGGTAATGTTGAAGCCATGGCTGTGTTGAGCATTGGAGCTGGTGATGGTTCTAGAAGGAGGGATTCAATCATCTTAACTTTTAAAGATGCAAAGATTTCAGTTCTAGAGTATGATGATTCTATTCATGGACTTCGTACAAGTTCCTTGCATTGTTTTGAGGGTCCAGAATGGCTTCATTTGAAAAGAGGAAGAGAACAGTTTGCAAGTGGTCCCCTGGTAAAGGTTGATCCTCAAGGCAGGTGTGGTGGGGTTCTTGTCTATGATTTGCAAATGATAATACTAAAGGCTACTCAGGCTGGTTCTGGTTTAGTTGGAGACGATGATACCTTGGGTTCTGGAGGTGCAGTTGCTGCTCGTATTGAGTCATCTTATATGATAAATCTACGTGACTTGGATATGAGGCATGTAAAAGATTTTACATTTGTTCATGGATATATTGAACCTGTTATGGTCATCCTGCATGAATGCGAGCTTACTTGGGCTGGGCGTCTCTCATGGAAGCACCATACATGCATGATATCTGCACTTAGTATTAGCACAACTTTGAAGCAGCATCCACTCATTTGGTCAGCTGTTAATCTCCCCCATGATGCCTACAAGCTTCTAGCAGTGCCCTCACCAATAGGTGGTGTTCTTGTAATTGGAGCTAACACTATTCATTATCATAGTCAGTCTGCTTCATGTGCATTGGCCTTGAATAGCTATGCTGTTTCACTTGATAGCAGTCAGGAGATGCCAAGATCAACTTTCAATGTGGAGCTTGATGCTGCCAATGCAACTTGGCTGTCGAATGACGTGGCCTTGCTGTCGACAAAAACTGGCGAACTGCTATTGCTTGTGCTTGTTTATGATGGAAGGGTCGTGCAGAGACTTGATCTTTCCAAGTCAAAAGCTTCAGTTTTGTCATCTGGTATAACGACAATTGGAAATTCTCTGTTTTTTCTCGCGAGTCGATTGGGAGACAGTATGCTGGTGCAATTTTCTTGTGGATCTGGTGTTTCAATGTCATCGTCTAATAATCTAAAAGAGGAGGTTGGTGATATTGAAGTAGATGCTCCTTCATCAAAGAGATTGCGAAGGTCACCTTCTGATGCTTTGCAAGATTTGGTTAGTGGCGAGGAACTTTCATTGTATGGATCTGCACCAAATAGAACAGAATCAGCACAGAAAACATTCTCATTTGCAGTTAGGGATTCATTGATTAACGTTGGTCCTCTAAAAGATTTCTCATATGGTTTGAGGATAAATGCTGATGCAAATGCTACAGGGATTGCCAAACAGAGTAACTATGAATTGGTGTGCTGTTCTGGTCATGGAAAGAATGGTTCTATCTGTGTTCTTCGGCAATCAATTCGCCCAGAAGTGATAACTGAGGTTGAACTTCCTGGTTGCAAAGGAATTTGGACTGTTTATCATAAGAGCTCACGGTCTCATAGTGCTGATTCCTCTAAGATGGCTAATGATGATGATGAATATCATGCATACCTGATTATAAGTTTGGAGGCTCGTACTATGGTACTAGAAACAGCTGATCTTCTTAGTGAGGTTACTGAAAGTGTAGAGTATTATATTCGTGGTAAAACACTTGCTGCAGGAAATTTATTTGGAAGGCGTCGAGTTATCCAAGTTTTTGAGCATGGTGCTCGAATTCTTGACGGGTCTTTTATGACCCATGAAAAATTTTTTGGATCTTCTAACTCTGAATCTAATTCTGGATCTGAGAATGTGATGGCGGTTTCTGTTTCTATTGCTGATCCATACGCATTGATCAGAATGAGCGATGGAAGTATTCGACTTTTAATTGGAGATCCTAGTACCTGTACCATATCTGTTACTACTCCGGCTTCACTTGAAAGCTCAAAAGGATCAGTTTCTTCTTGCACACTGTATCATGATAAAGGGCCTGAGCCATGGCTAAGGAAGACAAGTACTGATGCATGGCTTTCTACTGGTGTTGGTGAGGCTATTGATGGTGCAGATGGTGCAGCTCAGGACCATGGAGATATTTATTGTGTTATGTGTTATGAAAATGGTAGCCTTGAAATATTTGATGTGCCCAATTTTAGTTGTGTTTTTTCTGTGGAAAACTTTATGTCTGGAAAGAGTCACCTTATTGATGCTCTGATGAAAGAGGTGCCAAAAGATTTTGAAAAAGTGGACAGAGGTTCCAATGGCATAAGTGGTCAAGGCAGGATGGAAAATGTTCCGGATATGAAAGTTGTTGAGTTAGCCATGCACAGATGGTCAGGACAGCACAGCCGTCCATTTCTTTTTGGGATTTTGAGTGATGGAACAATTCTTTGTTATCATGCCTATCTTTATGAAAGTCTAGATGGTAATTCCAAACTCGAGGATTCAGTATCTGCAGGAGGACCAGCTGGTCTTAACAGTACTAATGTTTCCAGGCTTAGAAATTTGAGATTTGTTCGGGTTCCCATGGATGCGTATGCCAGGGAGGAGACATCAAATGTATCCCCTTGTCAGCAAATTACCGTTTTCAAGAATATTGGTGGTTATCAAGGATTCTTTCTATCAGGGTCTAGACCAGCTTGGGTTATGATGTTGAGAGAGCGATTACGTGTTCATCCACAGCTATGTGATGGATCTATTGTTGCTTTTACGGTTCTTCACAATGTGAACTGCAACCATGGGCTCATATATGTTACATCACAGGGTGTTTTGAAGATATGCCAGTTGCCTTCTGGATCAAACTATGACTGCTACTGGCCTGTGCAGAAAATTCCACTGAAGGCCACCCCACATCAAGTAACATACTTTGCGGAGAAGAATCTATATCCACTTATTGTCTCAGTTCCTGTTCCTAAACCACTTAATCAAGTTGTTTCTCTAGTTGAACAAGATTCCAACCATCAGAGTGAGAGCCAGAATCTAAATCCTGATGAACAAAACCGTTTTTATTCTGTTGATGAATTTGAGGTTCGTATTATGGAGCCAGATAAGTCTGGTGGCCCTTGGCAAACAAAGGCAACAATTCCTATGCAAACTTCTGAAAATGCCCTTACTGTGAGAATGGTTACACTGCTGAATACATCCTCCAAAGAAAATGAAACCCTTTTGGCTGTTGGCACTGCTTATGTGCAAGGAGAAGATGTGGCTGCTAGAGGACGTATCCTGCTGTTCTCTCTAGGAAAAAATACCGATAATTCTCAAACTCTGGTTTCAGAGGTGTACTCAAAGGAATTAAAAGGAGCTATATCTGCCTTGGCCTCTCTTCAGGGCCATCTGTTGATAGCATCTGGTCCAAAAATTATTTTGCACAAGTGGACTGGCACTGAGTTGAATGGGATTGCATTTTTTGATGCACCACCATTACATGTTGTGAGCTTAAATATAGTAAAAAACTTCATCCTCATTGGTGACATCCATAAAAGTATATATTTCCTTAGTTGGAAAGAGCAGGGTGCTCAACTTAGCTTATTAGCCAAAGATTTTGGTAATCTTGATTGCTTTGCGACGGAGTTTCTGATTGATGGGAGTACTCTGAGTCTCATGGTTTCAGATGATCAAAAGAACATCCAGATCTTTTACTATGCACCGAAGATGTCCGAGAGTTGGAAAGGACAGAAGCTTCTTTCAAGAGCCGAATTTCATGTCGGTGCCCATGTGACTAAGTTCTTGAGGTTGCAGATGCTATCCACTTCTGATCGAAGTGGTTCTGGCTCCGATAAAACCAATCGATTTGCCTTATTGTTTGGTACCTTGGATGGCAGTATAGGTTGCATTGCGCCTCTCGATGAACTTACATTTCGAAGACTTCAATCATTACAGAGAAAGCTTGTTGATGCCGTACCCCATCTTGCTGGCCTTAATCCGAGAGCTTTCAGGCAGTTCCGATCAAATGGAAAGGCCCATCGGCCTGGCCCCGACAGTATAGTGGACTGTGAGCTTCTATGCCATTATGAAATGCTTCCGTTGGAGGAACAACTTGAAATCGCACACCAGGTTGGAACAACTAGATCACAAATCCTCTCAAATCTAAGTGATCTGGCTCTTGGAACTAGCTTCTTGTGA 4377 0.4329 MSFAAYKMMHCPTGIDNCASGFLTHSRADYVPRVPPLPADDLDPDSDWPNPATRRDLGPIPNLILTSANVLEVYAVRVHEESAKGPPAAAESSRGGVFDGVTGASLELVCHYRLHGNVEAMAVLSIGAGDGSRRRDSIILTFKDAKISVLEYDDSIHGLRTSSLHCFEGPEWLHLKRGREQFASGPLVKVDPQGRCGGVLVYDLQMIILKATQAGSGLVGDDDTLGSGGAVAARIESSYMINLRDLDMRHVKDFTFVHGYIEPVMVILHECELTWAGRLSWKHHTCMISALSISTTLKQHPLIWSAVNLPHDAYKLLAVPSPIGGVLVIGANTIHYHSQSASCALALNSYAVSLDSSQEMPRSTFNVELDAANATWLSNDVALLSTKTGELLLLVLVYDGRVVQRLDLSKSKASVLSSGITTIGNSLFFLASRLGDSMLVQFSCGSGVSMSSSNNLKEEVGDIEVDAPSSKRLRRSPSDALQDLVSGEELSLYGSAPNRTESAQKTFSFAVRDSLINVGPLKDFSYGLRINADANATGIAKQSNYELVCCSGHGKNGSICVLRQSIRPEVITEVELPGCKGIWTVYHKSSRSHSADSSKMANDDDEYHAYLIISLEARTMVLETADLLSEVTESVEYYIRGKTLAAGNLFGRRRVIQVFEHGARILDGSFMTHEKFFGSSNSESNSGSENVMAVSVSIADPYALIRMSDGSIRLLIGDPSTCTISVTTPASLESSKGSVSSCTLYHDKGPEPWLRKTSTDAWLSTGVGEAIDGADGAAQDHGDIYCVMCYENGSLEIFDVPNFSCVFSVENFMSGKSHLIDALMKEVPKDFEKVDRGSNGISGQGRMENVPDMKVVELAMHRWSGQHSRPFLFGILSDGTILCYHAYLYESLDGNSKLEDSVSAGGPAGLNSTNVSRLRNLRFVRVPMDAYAREETSNVSPCQQITVFKNIGGYQGFFLSGSRPAWVMMLRERLRVHPQLCDGSIVAFTVLHNVNCNHGLIYVTSQGVLKICQLPSGSNYDCYWPVQKIPLKATPHQVTYFAEKNLYPLIVSVPVPKPLNQVVSLVEQDSNHQSESQNLNPDEQNRFYSVDEFEVRIMEPDKSGGPWQTKATIPMQTSENALTVRMVTLLNTSSKENETLLAVGTAYVQGEDVAARGRILLFSLGKNTDNSQTLVSEVYSKELKGAISALASLQGHLLIASGPKIILHKWTGTELNGIAFFDAPPLHVVSLNIVKNFILIGDIHKSIYFLSWKEQGAQLSLLAKDFGNLDCFATEFLIDGSTLSLMVSDDQKNIQIFYYAPKMSESWKGQKLLSRAEFHVGAHVTKFLRLQMLSTSDRSGSGSDKTNRFALLFGTLDGSIGCIAPLDELTFRRLQSLQRKLVDAVPHLAGLNPRAFRQFRSNGKAHRPGPDSIVDCELLCHYEMLPLEEQLEIAHQVGTTRSQILSNLSDLALGTSFL 1458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g02616 1458 PANTHER DNA REPAIR/RNA PROCESSING CPSF FAMILY 9 1444 - -
Arst5g02616 1458 FunFam cleavage and polyadenylation specificity factor subunit 1 982 1365 - -
Arst5g02616 1458 Gene3D - 982 1365 IPR015943 GO:0005515
Arst5g02616 1458 MobiDBLite consensus disorder prediction 35 54 - -
Arst5g02616 1458 Pfam Mono-functional DNA-alkylating methyl methanesulfonate N-term 136 698 IPR018846 -
Arst5g02616 1458 FunFam Cleavage and polyadenylation specificity factor subunit 1 58 451 - -
Arst5g02616 1458 Gene3D - 59 455 IPR015943 GO:0005515
Arst5g02616 1458 Pfam CPSF A subunit region 1093 1423 IPR004871 GO:0003676|GO:0005634
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g02616 K14401 - gmx:100785543 2523.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g02616 5 80413844 80427060 Arst5g02616 5 80413844 80427060 ECH