Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g02232 ATGACTGGTGGTAGTGGATACATGGTAGAAGTTACTGGACTTTCGCCAAAAACCACCGAGAAAGATCTCCACCATTTCTTCGCTTTCTCCGGCGCGATCGAGCACGTTGAAATCGTTAGGTCTGGTGATTGTGCTTGTACTGCATATGTGACATTCAAAGATGCATATTCTCAAGAAACTGCTTGCTTGCTTAGTGGAGCCACTATTTTAGATCAACGTGTATGCATAACGCGTTGGGGGCAGTGCGACGATGGCTATGGTTTTTGGAATCAGCCTTCCTACAACCATGCCGATGAGACTGCTTCAGATACACAACATAGAGGCCAATTTGTTTCCTCTGCTGGAGAAGCAGTTACTGCGGCTCAAGAAGTTGTGAAGACCATGCTAGCAAAGGGATATGTTCTCAGTAAGGACGCATTGGCTAAGGCTAGAGAGTTCGACGAATCTCATCAGGTTTCTGCGACTGCAACAGCGAAAGTTTCTGAACTGAGCGAGAGACTTCGCCTCGCTGACAAGATATCAGCAGGTGTTGGAGCTGTGAAATCTGTGGATCAGAAATATAATGTCTCTGAAACAGCCAGGTCAGCTGCATCTGCAACTGGAAGATCGGTGGCAGCCGCCGCGGACTCTGTAGTAAATAGTAGCTATTTTTCGAAGGGAGCATTGTGGCTGTCAGGTGCTCTAACCCGAGCAGCTCATGCTGCTTCTGACTTGGGTGCTCGTGGCGGTGGTCAGCACTGA 741 0.4845 MTGGSGYMVEVTGLSPKTTEKDLHHFFAFSGAIEHVEIVRSGDCACTAYVTFKDAYSQETACLLSGATILDQRVCITRWGQCDDGYGFWNQPSYNHADETASDTQHRGQFVSSAGEAVTAAQEVVKTMLAKGYVLSKDALAKAREFDESHQVSATATAKVSELSERLRLADKISAGVGAVKSVDQKYNVSETARSAASATGRSVAAAADSVVNSSYFSKGALWLSGALTRAAHAASDLGARGGGQH 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g02232 246 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR 8 240 - -
Arst5g02232 246 SUPERFAMILY RNA-binding domain, RBD 7 78 IPR035979 GO:0003676
Arst5g02232 246 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 7 81 IPR000504 GO:0003723
Arst5g02232 246 Gene3D - 4 81 IPR012677 -
Arst5g02232 246 CDD RRM_Vip1_like 9 77 IPR034360 -
Arst5g02232 246 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 11 72 IPR000504 GO:0003723
Arst5g02232 246 SMART rrm1_1 8 78 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g02232 Arst-Chr5 40404913 40407789 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g02232 - - gsj:114378905 360.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g02232 5 40404913 40407789 Arst5g02232 5 40404913 40407789 ECH