Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g02064 TTCATTCTCTCACTCCTTCCAACTCGCCACACTCCTTTCCCATTTACACGAGCCGCCACTACTCTCCCCTTCTCTCTTCTACTTCGCCACCGTTCCGTCCACTCTTCCCTCCGTTTCCAAATCTCCTTTAAGTCCCCATCCTCTACTCTTCACGAGGCTGACGAAGACGAAGAAGGCGAACAAGATTTTGAAGAAAATGAAGAAGATGATGAATTCGAATACGACGACGACGAAGATGTTGCTGCTGATGAATACGACGACGTTTCGAGCGAGGCGTACGATGGCGCCGTTTCCGACGAAGGCGAGGAAGCGTTCGAGGCTGCTAGACTTGGCAACGATGGAACGTTCAAGTGGCAGAGAGTTGAGAAGCTCTGCAAAGAGGTCAGGGAGTTCGGCTCCGATATCATCGACGTCGACGAGCTTGCCTCCGTTTACGATTTCCGAATCGATAAGTTTCAGCGGCTGGCAATACAAGCTTTTCTAAGAGGCTCATCGGTTGTGGTGTCGGCTCCAACGAGCAGCGGGAAGACTCTGATAGCGGAATCTGCGGCGGTTGCCACTGTTGCCAGGGCCAATCAGAAGTTCCGAGAATTTCGGGAGACTTTTGGAGACAACAATGTTGGCCTTCTTACAGGAGATTCCGCTGTCAACAGGGATGCTCAAGTCTTGATTATGACCACAGAGATTTTGCGCAACATGCTATATCAGAGTGTTGGTAATATTTCTTCAGGAGGTGGACTTCTCCATGTTGATGTGATCGTTTTGGATGAAGTTCATTACCTTAGTGACATATCTCGTGGTACAGTTTGGGAAGAAATTGTTATTTATTGCCCTAAAGAAGTTCAACTAATTTGTTTGTCAGCAACTGTTGCAAATCCTGATGAGTTGGCTGGCTGGATTGGCCAGATTCATGGTTCAACAGAGTTGGTAACATCATCAAAACGCCCAGTTCCACTAACTTGGCATTTCTCTTTGAAAAATTCCTTATTGCCACTTCTTGATGAGAAAGGAACACGCATGAACAGGAAGCTGTCTCTCAATTATTTACAACTTCAAGGTGCAGGGGTCAAATCTTACAATGATGATTGGCCTAGAAGAAAGAATTCCCGGAGACGAGGAACGAGGTACGATAGTGATGGTAGCACACTGGAAAATCGTTCTCTTTCAAAGAATAATATAAATGCAATTCGTCGTTCACAGGTTCCTCAAATAATTGATACTCTATGGCAACTTCAGTCTAGGGATATGCTGCCAGCTATATGGTTTATATTTAGCAGAAAGGGCTGTGATGCAGCTGTGCAATATGTTGAAAATTGCAATCTTTTAGATGAGTGTGAAACAAGTGAGGTTGAACTTGCCTTGAAGAGGTTCCGCATTCAATATCCTGATGCTGTCAGAGAAACCGCTGTGAAAGGACTTCTGCAAGGAGTTGCTGCACATCATGCGGGTTGTCTTCCCTTGTGGAAAGCTTTCATTGAAGAATTGTTTCAAAGAGGGCTTGTCAAGGTTGTTTTTGCTACAGAAACACTGGCTGCAGGAATCAACATGCCAGCTAGAACTGCTGTTATTTCATCCCTCAGCAAAAGAGGTGATAGTGGACGTGTCCAGTTAAGCACAAATGAACTGCTTCAGATGGCTGGGCGTGCTGGGCGAAGGGGCATTGATGAAAGTGGTCATGTGGTGCTCATACAGACACCTAATGAGGGTGCTGAAGAGTGCTGCAAGGTGCTGTTTGCTGGACTTGAGCCCCTAGTCTCACAATTTACTGCTTCGTTTGGAATGGTTTTAAATCTTCTTGCAGGTGTGAAAGCCATTCATAGGTCAAATGAGTCAGATGATGGGAGACCTTCATCAGGGAGAACTTTGGAAGAAGCTAGGAAGTTAGTTGAGCAGAGTTTTGGAAATTACGTTAGTAGCAATGTTATGCTGGCTGCTAAAGAGGAAATTAATAAAATTGAGAAAGAAATTGAGATTCTGATGTCAGAAATAACTGATGAAGCCATAGATAAAAGAAGCAGGAAAGCTTTATCACAGCGACAATATAAGGAGATTGCAGAATTGCAGGAGCAGTTAAGGGCAGAAAAACGTGTTCGGGCTGAACTGCGTAAACAGATGGAAGCAACAAGAATATCTGCTCTAAAACCTTTGTTGGAAGACCCTGAAAATGGACATCTACCATTTTTGTGCTTGCAGTACACAGATTCTGAAGGAACTCAACATTCACTGCCTGCTGTGTTTCTGGGGAAGGTTGACTCACTTAATGCTTCAAAACTTAAGAACTTGGTATCTTCTGCTGATTCTTTTGCACTAAATTTAGGTGATGCGGAACCAACCATTACTGATTCAGTATTGGATGATGGCCTTGAACCATCATACCATGTGGCTCTTGGTTCTGATAACTCTTGGTATCTATTTACAGAAAAGTGGATTAAAACAGTATATGGGACTGGCTTTCCTAACGTTCCATTGGCTCAAGGGGATGCTCTACCACGAGAAATTATGAGCACTCTCCTTGATAAGGAGGACATGAAGTGGGATAATCTTGCGCAATCTGCCTATGGTGGTTTATGGTTCATGGAAGGCTCTTTAGATACATGGTCTTGGAGTCTGAATGTTCCTGTTTTGAGTAGCTTCTCTGAAAATGATGAGCTACTGCTAAAATCTCAAGCCTACAGAGATGCTGTAGACCGTTACAAGGATCAAAGAAATAAAGTTTCACGCTTGAAGAAAAAGATTTCTCGTACAGAAGGCTACAAAGAATACAGTAAAGTCATAGACGCAGTCAAGTTTACGGAGGAGAAAATCAAGCGCTTGCAGAATAGATCAAAACGTCTAACTAATCGAATAGAACAAATTGAACCCTCCGGATGGAAGGAGTTTATGCAGGTTAGCAATGTCATACATGAAACCAGAGCATTGGACAAAAACACGCAGGTCATATTTCCACTTGGGGAAACTGCAGCAGCAATCCGAGGAGAAAACGAGCTTTGGCTTGCAATGGTTCTTCGCAGCAAAATTCTTCTAGAGCTAAAACCTCCACAACTTGCTGCAGTTTGTGCAAGCTTGGTCTCTGAGGGTATCAAACTCCGACCATGGAAGAATAACAGTTACATTTACGAGCCAACCACAACAGTTATGAATGTCATAAAGTTATTGGATGAACAAAGAAGTGCCCTGTTGACCATTCAGGAGAAACATGGGGTGATGATACCTTGCTGTTTGGATAGCCAGTTTTGCGGTATGGTTGAAGCATGGGCTTCTGGGTTGACTTGGAGAGAGATAATGATGGATTGTGCAATGGACGAAGGCGATCTTGCTCGCCTCCTACGTAGGACTATTGATCTGCTAGCTCAGATTCCAAAATTGGCAGACATTGATCCTTTGTTGCAGCGCAATGCAAAGGCTGCATATGATGCCATGGACCGGCCGCCAATTAGTGAGCTTGCCGGGTAG 3453 0.4414 FILSLLPTRHTPFPFTRAATTLPFSLLLRHRSVHSSLRFQISFKSPSSTLHEADEDEEGEQDFEENEEDDEFEYDDDEDVAADEYDDVSSEAYDGAVSDEGEEAFEAARLGNDGTFKWQRVEKLCKEVREFGSDIIDVDELASVYDFRIDKFQRLAIQAFLRGSSVVVSAPTSSGKTLIAESAAVATVARGXNQKFREFRETFGDNNVGLLTGDSAVNRDAQVLIMTTEILRNMLYQSVGNISSGGGLLHVDVIVLDEVHYLSDISRGTVWEEIVIYCPKEVQLICLSATVANPDELAGWIGQIHGSTELVTSSKRPVPLTWHFSLKNSLLPLLDEKGTRMNRKLSLNYLQLQGAGVKSYNDDWPRRKNSRRRGTRYDSDGSTLENRSLSKNNINAIRRSQVPQIIDTLWQLQSRDMLPAIWFIFSRKGCDAAVQYVENCNLLDECETSEVELALKRFRIQYPDAVRETAVKGLLQGVAAHHAGCLPLWKAFIEELFQRGLVKVVFATETLAAGINMPARTAVISSLSKRGDSGRVQLSTNELLQMAGRAGRRGIDESGHVVLIQTPNEGAEECCKVLFAGLEPLVSQFTASFGMVLNLLAGVKAIHRSNESDDGRPSSGRTLEEARKLVEQSFGNYVSSNVMLAAKEEINKIEKEIEILMSEITDEAIDKRSRKALSQRQYKEIAELQEQLRAEKRVRAELRKQMEATRISALKPLLEDPENGHLPFLCLQYTDSEGTQHSLPAVFLGKVDSLNASKLKNLVSSADSFALNLGDAEPTITDSVLDDGLEPSYHVALGSDNSWYLFTEKWIKTVYGTGFPNVPLAQGDALPREIMSTLLDKEDMKWDNLAQSAYGGLWFMEGSLDTWSWSLNVPVLSSFSENDELLLKSQAYRDAVDRYKDQRNKVSRLKKKISRTEGYKEYSKVIDAVKFTEEKIKRLQNRSKRLTNRIEQIEPSGWKEFMQVSNVIHETRALDKNTQVIFPLGETAAAIRGENELWLAMVLRSKILLELKPPQLAAVCASLVSEGIKLRPWKNNSYIYEPTTTVMNVIKLLDEQRSALLTIQEKHGVMIPCCLDSQFCGMVEAWASGLTWREIMMDCAMDEGDLARLLRRTIDLLAQIPKLADIDPLLQRNAKAAYDAMDRPPISELAG 1151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g02064 1151 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 157 568 IPR027417 -
Arst5g02064 1151 Coils Coil 922 949 - -
Arst5g02064 1151 PANTHER ATP-DEPENDENT RNA AND DNA HELICASE 71 1135 - -
Arst5g02064 1151 MobiDBLite consensus disorder prediction 48 85 - -
Arst5g02064 1151 CDD SF2_C_Ski2 398 566 - -
Arst5g02064 1151 Gene3D - 933 1143 - -
Arst5g02064 1151 Gene3D - 112 316 IPR027417 -
Arst5g02064 1151 Gene3D - 317 585 IPR027417 -
Arst5g02064 1151 SMART helicmild6 468 554 IPR001650 -
Arst5g02064 1151 MobiDBLite consensus disorder prediction 361 380 - -
Arst5g02064 1151 MobiDBLite consensus disorder prediction 53 85 - -
Arst5g02064 1151 SMART ultradead3 145 323 IPR014001 -
Arst5g02064 1151 FunFam DExH-box ATP-dependent RNA helicase DExH15 chloroplastic 933 1143 - -
Arst5g02064 1151 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 416 601 IPR001650 -
Arst5g02064 1151 Coils Coil 643 663 - -
Arst5g02064 1151 SMART DSHCT_2 976 1150 IPR012961 -
Arst5g02064 1151 Pfam DSHCT (NUC185) domain 980 1146 IPR012961 -
Arst5g02064 1151 Coils Coil 882 912 - -
Arst5g02064 1151 MobiDBLite consensus disorder prediction 361 384 - -
Arst5g02064 1151 Coils Coil 678 705 - -
Arst5g02064 1151 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 157 309 IPR014001 -
Arst5g02064 1151 Pfam DEAD/DEAH box helicase 152 292 IPR011545 GO:0003676|GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g02064 Arst-Chr5 29938229 29944450 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g02064 K26077 - gmx:100780908 1796.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g02064 5 29938229 29944450 Arst5g02064 5 29938229 29944450 ECH