Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g01921 ATGCTATGCTCTCTAATCCAGCTCCGCCGCTACGCTACTAGCTCCTCTTCCCCACTCTCTCCCCTCCACAATCTCGGTTACTTCTTTTACTCCACCGTAACCGCCATGGTGCCCCACCCCAAGGACGATGAGTACCTGAACGCTGCCATTCCGAAGCGTATCAAGATGTTCGAGTCCATCCAGGCCGAGCAGAAAACCCAGCGCCTCTCACTGTCGCCGGATCCAATCAAGGTCACACTTCCCGACGGCACGGTCAAGGACGCCGCCAAGTGGCAAACGACACCGTTCGATGTGGCGAAAGAGATTTCCAAGAACCTCGCCAACAACGCACTCATCGCGAGGGTCAATGGTGTGCTATGGGACATGGCCAGGCCTCTCGAGCAGGATTGCGAACTCAGGATCTACAAGTTCGAAGACGACGAAGGCCGCGATACGTTCTGGCATTCTAGCGCTCACATTCTTGGCCAGTCGCTTGAGTTGGAGTACGGATGCAAGCTCTGCATTGGGCCTTGTACTACAAGAGGAGAGGGTTTCTATTATGATGCGTTTTATGGTGACTTGGGATTGAATGATGATCATTTCAAGCAAATTGAGGCTGGGGCGTTGAAGGCAGCAGGGGAGAAACAACCTTTTGAGCGCATTGAAGTAACACGTGATCAAGCACTTGAGATGTTTTCAGATAATATGTTCAAGGTTGAAATTATCAATGATTTGCCTGCTGATAAAACTATCACAGTATACAGATGTGGTCCACTAGTAGATCTGTGTCGTGGACCACATATACCCAATACTTCATTTGTTAAGGCAATTGCCTGTTTGAAGGCTTCTTCAGCATATTGGAGGGGGAACAAAGATCGGGAGACTTTACAAAGAGTTTATGGCATATCTTATCCTGATCAGAAGAGTTTAAAGGAATATTTGCTTAGGCTGGAGGAGGCTAAAAAGTATGATCACAGGATTTTGGGAGTGAAACAGGAGCTTATTTTTCATCATGAATGGAGCCCAGGAAGCTGGTTTTTCCTTCCACATGGTGCACTGGTATACAAAAAATTGATAGGTTTCATAGAGAGTCAATACAGAGTCAGGGGCTATCAAGAGGTCATATCTCCAAATGTATTTAACATGGATCTCTGGAAGCAATCTGGGTTTGATCTGTTCTAGATTGAAAAGCACGAATTTGGGCTGAAACCAATGAATTGCCCAGGGCACTGCTTGGTCTTCAAGCATAGAGTTCGCTCGTACAGGGAACTTCCCCTTCGCATGGCTGATTTTGGGGTCTTGCATAGAAATGAGGCTAGTGGTGCTTTGAGTGGATTGACACGTGTTAGGAGATTTCAGCAGGATGATGCACATATTTTTTGCAGGGAGTCTCAGATAAAGGATGAAGTTAGAGAAGCCTTGAAGTTCATCGATTATGTCTATGAAATATTTGGTTTCACATACGATCTCAAGCTTTCAACGAGGCCAGAGAAATCCATAGGAGAAACAGCAACATGGGAGAAAGCTGAAAGTGCCCTTAAGGAAGCTCTGGATGAATTTGGGAAGCCTTGGCAGCTGAATGAAGGGGATGGTGCATTCTATGGACCAAAGATTGATATCGATGTATCTGATGCATTGAGTAGGAAATTTCAGTGCGCAACTTTGCAGCTTGATTTCCAACTACCTGATCGTTTTAAGTTGGAATACTCGGCTGAGGATGAAGCCAAGATTGAGAGGCCTGTCATGATACACAGGGCCATTCTAGGATCTGTTGAGCGCATGTTTGCCATACTTTTAGAGCACTACAAGGGTAAATGGCCCTTCTGGCTAAGTCCTCGTCAAGCAATTGTTTGCCCTGTGTCGGAGAAATCACAAGCTTATGCAGAGAAGGTGAAAGATGAAATCTACAGCAAAGGGTTTCATGTTGATGCTGATTTAACAGATAGGAAGATTCAAAAGAAGGTGCGAGAGGCTCAGCTAGCACAGTACAACTACATCTTGGTTGTTGGAGAGCAGGAAGCAGAAACTGGACAGGTGAGCGTGCGGGTAAGAGATAAGGCGGACCTTACCACTATGAGTATCGAGGGCCTGCTCGAACGGTTCAGTGAAGATGCAAAAAATTTCCGTTGA 2109 0.4618 MLCSLIQLRRYATSSSSPLSPLHNLGYFFYSTVTAMVPHPKDDEYLNAAIPKRIKMFESIQAEQKTQRLSLSPDPIKVTLPDGTVKDAAKWQTTPFDVAKEISKNLANNALIARVNGVLWDMARPLEQDCELRIYKFEDDEGRDTFWHSSAHILGQSLELEYGCKLCIGPCTTRGEGFYYDAFYGDLGLNDDHFKQIEAGALKAAGEKQPFERIEVTRDQALEMFSDNMFKVEIINDLPADKTITVYRCGPLVDLCRGPHIPNTSFVKAIACLKASSAYWRGNKDRETLQRVYGISYPDQKSLKEYLLRLEEAKKYDHRILGVKQELIFHHEWSPGSWFFLPHGALVYKKLIGFIESQYRVRGYQEVISPNVFNMDLWKQSGXFDLFXIEKHEFGLKPMNCPGHCLVFKHRVRSYRELPLRMADFGVLHRNEASGALSGLTRVRRFQQDDAHIFCRESQIKDEVREALKFIDYVYEIFGFTYDLKLSTRPEKSIGETATWEKAESALKEALDEFGKPWQLNEGDGAFYGPKIDIDVSDALSRKFQCATLQLDFQLPDRFKLEYSAEDEAKIERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSEKSQAYAEKVKDEIYSKGFHVDADLTDRKIQKKVREAQLAQYNYILVVGEQEAETGQVSVRVRDKADLTTMSIEGLLERFSEDAKNFR 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g01921 703 FunFam Threonine--tRNA ligase 299 599 - -
Arst5g01921 703 SUPERFAMILY Class II aaRS and biotin synthetases 317 593 IPR045864 -
Arst5g01921 703 SUPERFAMILY TGS-like 76 136 IPR012676 -
Arst5g01921 703 CDD TGS_ThrRS 76 141 - -
Arst5g01921 703 Pfam TGS domain 76 136 IPR004095 -
Arst5g01921 703 Pfam Anticodon binding domain 608 697 IPR004154 -
Arst5g01921 703 Gene3D Bira Bifunctional Protein; Domain 2 299 599 IPR045864 -
Arst5g01921 703 Gene3D - 139 297 - -
Arst5g01921 703 CDD ThrRS_anticodon 606 695 IPR047246 -
Arst5g01921 703 Hamap Threonine--tRNA ligase [thrS]. 141 701 IPR002320 GO:0004829|GO:0005524|GO:0005737|GO:0006435
Arst5g01921 703 Pfam Threonyl and Alanyl tRNA synthetase second additional domain 244 293 IPR012947 GO:0004812|GO:0005524|GO:0043039
Arst5g01921 703 FunFam Threonine--tRNA ligase mitochondrial 1 600 703 - -
Arst5g01921 703 FunFam Threonine--tRNA ligase, cytoplasmic 74 135 - -
Arst5g01921 703 PANTHER THREONINE-TRNA LIGASE 46 702 - -
Arst5g01921 703 SMART tRNA_SAD_4 244 293 IPR012947 GO:0004812|GO:0005524|GO:0043039
Arst5g01921 703 PANTHER THREONINE-TRNA LIGASE 46 702 - -
Arst5g01921 703 Gene3D - 74 134 IPR012675 -
Arst5g01921 703 ProSiteProfiles Aminoacyl-transfer RNA synthetases class-II family profile. 342 601 IPR006195 -
Arst5g01921 703 FunFam Threonyl-tRNA synthetase, mitochondrial 140 297 - -
Arst5g01921 703 ProSiteProfiles TGS domain profile. 74 136 IPR004095 -
Arst5g01921 703 Pfam tRNA synthetase class II core domain (G, H, P, S and T) 390 596 IPR002314 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Arst5g01921 703 SUPERFAMILY ThrRS/AlaRS common domain 138 315 IPR018163 GO:0000166
Arst5g01921 703 SUPERFAMILY Class II aaRS ABD-related 594 699 - -
Arst5g01921 703 CDD ThrRS_core 317 606 IPR033728 -
Arst5g01921 703 NCBIfam threonine--tRNA ligase 147 697 IPR002320 GO:0004829|GO:0005524|GO:0005737|GO:0006435
Arst5g01921 703 Gene3D - 600 703 IPR036621 -
Arst5g01921 703 PRINTS Threonyl-tRNA synthetase signature 396 424 IPR002320 GO:0004829|GO:0005524|GO:0005737|GO:0006435
Arst5g01921 703 PRINTS Threonyl-tRNA synthetase signature 429 452 IPR002320 GO:0004829|GO:0005524|GO:0005737|GO:0006435
Arst5g01921 703 PRINTS Threonyl-tRNA synthetase signature 530 558 IPR002320 GO:0004829|GO:0005524|GO:0005737|GO:0006435
Arst5g01921 703 PRINTS Threonyl-tRNA synthetase signature 601 613 IPR002320 GO:0004829|GO:0005524|GO:0005737|GO:0006435
Arst5g01921 703 PRINTS Threonyl-tRNA synthetase signature 574 587 IPR002320 GO:0004829|GO:0005524|GO:0005737|GO:0006435
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g01921 Arst-Chr5 25258266 25266047 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g01921 K01868 - gmx:100812652 1194.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g01921 5 25258266 25266047 Arst5g01921 5 25258266 25266047 ECH