Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g01918 ATGAATCCCTTCTCTTCAGGAACCCGCTTGAGGGACATGATTCGGGCCATACGTGCTTCCAAGACTGCAGCTGAAGAACGAGCTGTAGTTAGAAAAGAATGTGCTGCCATTCGTGCTGCAATAAATGAAAATGATCAAGATTATAGGCATCGGAATTTGGCTAAGCTAATGTTTATCCACATGCTTGGCTACCCCACTCATTTTGGTCAAATGGAATGCCTCAAGTTGATAGCATCACCTGGATTTCCGGAGAAGAGAATAGGTTACCTTGGCCTCATGTTGCTACTTGATGAAAGACAAGAAGTTCTAATGTTGGTCACCAATTCTTTAAAACAAGATCTTAATCACACAAATCAGTATATAGTGGGACTTGCTCTTTGTGCTTTAGGAAATATTTGTTCAGCAGAAATGGCTCGTGATCTTGCGCCAGAGGTTGAAAGATTGCTGCAATTTCGTGACCCAAATATTCGGAAGAAGGCAGCATTATGTTCTATAAGGATCATCAAGAAAGTTCCAGACTTGGCAGAAAATTTTATCAATTCCGCTACTGCCTTACTAAGGGAGAAGCATCATGGAGTTTTGATCACTGGGGTTCAGCTTTGTACAGATCTGTGTAAAATTAGCCCAGAAGCCCTTGAACATGTTCGAAAGAAATGCACAGATGTTTTGGTCAGAACTCTTAGAGATCTAGCAAACAGTCCTTATTCACCAGAATATGATATTGCTGGCATCACAGACCCATTTCTCCATATCAGATTGCTTAAACTTTTGCGAGTGCTGGGCGAAGGTGATGCTGATGCTAGCGACTCTATGAATGACATACTTGCCCAGGTGGCTACAAAGACTGAGTCAAATAAAGTTGCAGGAAACGCCATTTTATATGAATGTGTTCAAACAATTATGAGCATTGAAGATAATGGAGGCTTGCGTGTTCTTGCCATCAACAGCCTGGGAAGATTCTTGTCGAACCGTGATAACAATATCAGATACGTGGCACTAAATATGCTGATGAAGGCTGTAACTGCTGATGGTCAGGCAGTGCAGAGGCACCGTGCAACAATTCTGGAGTGTGTAAAGGATTCAGATGCTTCTATTCGGAAAAGAGCACTTGAACTTGTTTACGTTCTGGTAAATGAAACAAATGTGAAGCCATTAGCAAAAGAACTAATAGATTATCTGGAAGTCAGTGAAAATGATTTCAGGGGAGACCTTACAGCCAAAATTTGCTCCATAGTTTCAAAGTTTTCCCCAGAGAAGATCTGGTACATTGATCAGATGCTCAAGGTTCTGTCTGAGGCTGGAAATTATGTAAAAGATGAAGTATGGCATGCCCTAATTGTTGTAATAACAAATGCTACTGAGCTTCATGGATATACTGTAAGGGCATTATACAGAGCATTTCAGACATCAGCTGAACAGGAATCTCTAGTTCGAGTTACAGTGTGGTGCATTGGAGAGTATGGTGACTTATTAGTCAATAATGTTGGAATGCTTGACATAGAAGATCCAATTACGGTGACTGAGTCGGATGCTGTGGATGTCTTGGAGATTGCTATAAAACGCCATGAATCAGATCTTACCACAAAAGCAATGGCTTTGGTTGCCCTATTAAAGCTTTCTTCACGTTTTCCTTCATGTTCAGAGAGGATCAAGGAAATCATTGTTCAGTTCAAAGGGAACCTCATGCTTGAATTGCAGCAGAGAGCTATAGAATTCAATTCAATTTTAGCAAAGCATCAGAATATTAGGTCTACTCTTGTAGAAAGGATGCCAGTGTTGGATGAGGCAACTTTTATTGGTAGGAAAGCTGGGTCTTTGCCAGGTGCAGCTTCAACTACAACAATGCCTTCAGTTGGTATTCCAAATGGAGAAGCTAAACCTGCAGCTCCACTTATAGATCTACTCGATCTAAGTTCAGACGATGCTCCAGCACCTAGTTCTTCTGGTGGTGATCTTCTTCATGACCTTCTTGGTGTTGATCTGTCACCAGCTCCTCAACAATCAGGTGCAGGTCAACCTTCAAAAAGTGGGACAGATGTTCTTTTGGATCTATTGTCCGTTGGATCACCTGCACAGAGCAGCTCATCTACAGTTGACATTTTAACTTCCAATACAAATGGCAAATCTCCAGTTTCACCATTAGATGATATTTCATCACTTTCACTTTCTTCAAGAGTAAATTCAAATGCTGGAGCTGCTCCTATGATGGATTTATTGGATGGTTTTGGTCCCAGCCCATCCAAAGAAAACAATGGACCAGTTTATCCATCCATAACTGCATATGAGAGTAGCTCCTTGAGGTTGACATTCAGTTTCTCAAAACAACCAGGAAACCCAGAAACAACAAATATCCAGGCTACCTTTACGAATTTGTCCTCTAATGTCTATACAGACTTTGTTTTCCAGGCAGCAGTTCCAAAGTTTCTTCAACTGCACTTAGATCCAGCTAGTAGCAATACTTTGCCTGCTGCTGGGAATGGATCCGTGACACAAAGTTTGAAAGTCACCAACAGCCAACATGGAAAGAAAAATCTTGTCATGCGCATAAGGATAGCTTACAAGTTGAATGGCAAGGATACACTGGAAGAAGGCCAAATCAATAATTTCCCTCGCGAATTATGA 2622 0.4127 MNPFSSGTRLRDMIRAIRASKTAAEERAVVRKECAAIRAAINENDQDYRHRNLAKLMFIHMLGYPTHFGQMECLKLIASPGFPEKRIGYLGLMLLLDERQEVLMLVTNSLKQDLNHTNQYIVGLALCALGNICSAEMARDLAPEVERLLQFRDPNIRKKAALCSIRIIKKVPDLAENFINSATALLREKHHGVLITGVQLCTDLCKISPEALEHVRKKCTDVLVRTLRDLANSPYSPEYDIAGITDPFLHIRLLKLLRVLGEGDADASDSMNDILAQVATKTESNKVAGNAILYECVQTIMSIEDNGGLRVLAINSLGRFLSNRDNNIRYVALNMLMKAVTADGQAVQRHRATILECVKDSDASIRKRALELVYVLVNETNVKPLAKELIDYLEVSENDFRGDLTAKICSIVSKFSPEKIWYIDQMLKVLSEAGNYVKDEVWHALIVVITNATELHGYTVRALYRAFQTSAEQESLVRVTVWCIGEYGDLLVNNVGMLDIEDPITVTESDAVDVLEIAIKRHESDLTTKAMALVALLKLSSRFPSCSERIKEIIVQFKGNLMLELQQRAIEFNSILAKHQNIRSTLVERMPVLDEATFIGRKAGSLPGAASTTTMPSVGIPNGEAKPAAPLIDLLDLSSDDAPAPSSSGGDLLHDLLGVDLSPAPQQSGAGQPSKSGTDVLLDLLSVGSPAQSSSSTVDILTSNTNGKSPVSPLDDISSLSLSSRVNSNAGAAPMMDLLDGFGPSPSKENNGPVYPSITAYESSSLRLTFSFSKQPGNPETTNIQATFTNLSSNVYTDFVFQAAVPKFLQLHLDPASSNTLPAAGNGSVTQSLKVTNSQHGKKNLVMRIRIAYKLNGKDTLEEGQINNFPREL 873
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g01918 873 PIRSF AP1_gamma 6 873 IPR017107 GO:0005794|GO:0016192|GO:0030121
Arst5g01918 873 PIRSF AP1_gamma 6 873 IPR017107 GO:0005794|GO:0016192|GO:0030121
Arst5g01918 873 ProSiteProfiles Gamma-adaptin ear (GAE) domain profile. 753 870 IPR008153 -
Arst5g01918 873 Gene3D - 2 594 IPR011989 -
Arst5g01918 873 Gene3D - 742 872 - -
Arst5g01918 873 FunFam AP-1 complex subunit gamma 744 873 - -
Arst5g01918 873 PANTHER ADAPTIN, ALPHA/GAMMA/EPSILON 11 861 - -
Arst5g01918 873 PANTHER ADAPTIN, ALPHA/GAMMA/EPSILON 11 861 - -
Arst5g01918 873 SMART alpha_adaptinc2 750 870 IPR008152 GO:0006886|GO:0016192
Arst5g01918 873 Pfam Adaptin N terminal region 27 578 IPR002553 GO:0006886|GO:0016192|GO:0030117
Arst5g01918 873 FunFam AP-1 complex subunit gamma 2 594 - -
Arst5g01918 873 SUPERFAMILY ARM repeat 25 593 IPR016024 -
Arst5g01918 873 Pfam Adaptin C-terminal domain 756 870 IPR008152 GO:0006886|GO:0016192
Arst5g01918 873 MobiDBLite consensus disorder prediction 687 715 - -
Arst5g01918 873 SUPERFAMILY Clathrin adaptor appendage domain 732 871 IPR013041 -
Arst5g01918 873 MobiDBLite consensus disorder prediction 637 715 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g01918 Arst-Chr5 25157859 25168783 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g01918 K12391 - gmx:100802164 1479.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g01918 5 25157859 25168783 Arst5g01918 5 25157859 25168783 ECH