Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g01874 ATGGGGCTGACATTCACAAAGCTTTTCAGTAGGCTCTTTGCCAAGAAGGAAATGAGGATTCTCATGGTGGGTCTTGATGCTGCTGGTAAGACCACTATCCTCTACAAGCTCAAGCTTGGAGAGATCGTCACTACAATTCCCACTATTGGGTTCAATGTGGAGACTGTTGAATACAAGAACATTAGCTTCACTGTTTGGGATGTTGGTGGCCAGGACAAGATCCGTCCATTGTGGAGGCACTATTTCCAGAACACCCAGGGTCTTATATTTGTTGTGGACAGCAATGACAGGGACAGAGTTGTTGAGGCCAGAGATGAGTTACATCGGATGTTGAATGAGGATGAACTGAGAGATGCTGTATTGCTTGTGTTTGCCAACAAACAAGATCTTCCTAATGCAATGAATGCTGCTGAGATTACTGACAAGCTGGGACTCCACTCTCTCAGACAACGCCACTGGTACATCCAGAGCACTTGTGCAACATCTGGGGAAGGCCTTTATGAAGGTTTGGACTGGCTTTCGAACAACATTGCCAATAAGGTAGTTGTTAGTTTATGGAAAAGTGCATTCATGCATATTGATGTTTAA 588 0.4456 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKVVVSLWKSAFMHIDV 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g01874 195 Pfam ADP-ribosylation factor family 5 177 IPR006689 GO:0003924|GO:0005525
Arst5g01874 195 SMART arf_sub_2 1 181 - -
Arst5g01874 195 CDD Arf1_5_like 18 176 IPR045872 GO:0003924
Arst5g01874 195 Gene3D - 4 185 IPR027417 -
Arst5g01874 195 SMART rab_sub_5 18 184 - -
Arst5g01874 195 NCBIfam small GTP-binding protein domain 16 157 IPR005225 GO:0005525
Arst5g01874 195 PANTHER ADP RIBOSYLATION FACTOR-RELATED 1 176 IPR024156 GO:0005525
Arst5g01874 195 SMART sar_sub_1 1 177 IPR006689 GO:0003924|GO:0005525
Arst5g01874 195 ProSiteProfiles small GTPase Arf family profile. 11 177 - -
Arst5g01874 195 FunFam ADP-ribosylation factor 1 1 181 - -
Arst5g01874 195 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 14 180 IPR027417 -
Arst5g01874 195 PRINTS GTP-binding SAR1 protein signature 19 42 IPR006689 GO:0003924|GO:0005525
Arst5g01874 195 PRINTS GTP-binding SAR1 protein signature 47 71 IPR006689 GO:0003924|GO:0005525
Arst5g01874 195 PRINTS GTP-binding SAR1 protein signature 74 99 IPR006689 GO:0003924|GO:0005525
Arst5g01874 195 PRINTS GTP-binding SAR1 protein signature 119 140 IPR006689 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g01874 Arst-Chr5 23601433 23603831 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g01874 K07937 - ncol:116259375 366.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g01874 5 23601433 23603831 Arst5g01874 5 23601433 23603831 ECH