Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g01813 ATGGCAACAATGCTGCTACTCCCTTTCCGAACTCTCATTCCTTCTTCTTCTTCCAGTTCAAACTTCCGACCGGCTCCGCTTCGTTGTTCCAACGATCGCCAGGCGCTCTTTAACCGCATTGCTCCTGTCTATGATAACCTGAATGATTTGCTGAGCTTGGGTCAGCATCGAATTTGGAAGCGCATGACTGTTTCCTGGGCTGGAGCTAAAGCAGGAGATCATGTGTTGGATATTTGCTGCGGAAGTGGCGATTTGTCCTTTCTCTTGTCCCAGAAAGTGGGGTCTGATGGAAAGGTGACTGGTCTTGATTTCTCCAAGGAACAACTATTGGTTGCCTCATCTAAACAGCACTCGAAGAACTGCTTCTCAAATATTGAGTGGATTGAAGGTGATGCTCTAGATTTGCCGTTTTCTAATGGTTCGTTTGATGCTATAACAATGGGCTATGGTCTTAGAAACGTAGTTGATAGGCCTAAAGCTATGCAGGAAATTTTAAGAGTCCTAAAAGCCGGCTCTAGAGTGGCTATCCTTGATTTCAATAAAAGTGAAGAGTTGCTGACTTCTACGATTACGGAATGGATGATTGACAATGTTGTTGTTCCAGTGGCATCTGCTTATGGCCTTTCAGAGGACTACAAATATCTTAAGACTTCAATAAGAGGATTTTTAACAGGGAAGGAATTGGAGAAACTTGCTTTAGAAGTTGGATTTTCCAGTGCTCGACATTATGAGCTCAGTGGAGGCTTGATGGGGTGCTTGGTAGCTATGCGTTAG 774 0.4419 MATMLLLPFRTLIPSSSSSSNFRPAPLRCSNDRQALFNRIAPVYDNLNDLLSLGQHRIWKRMTVSWAGAKAGDHVLDICCGSGDLSFLLSQKVGSDGKVTGLDFSKEQLLVASSKQHSKNCFSNIEWIEGDALDLPFSNGSFDAITMGYGLRNVVDRPKAMQEILRVLKAGSRVAILDFNKSEELLTSTITEWMIDNVVVPVASAYGLSEDYKYLKTSIRGFLTGKELEKLALEVGFSSARHYELSGGLMGCLVAMR 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g01813 257 Gene3D Vaccinia Virus protein VP39 39 257 IPR029063 -
Arst5g01813 257 ProSiteProfiles UbiE family SAM-binding methyltransferase profile. 28 257 IPR004033 GO:0008168
Arst5g01813 257 PANTHER METHYLTRANSFERASE 42 239 - -
Arst5g01813 257 Pfam ubiE/COQ5 methyltransferase family 34 252 - -
Arst5g01813 257 CDD AdoMet_MTases 75 176 - -
Arst5g01813 257 Hamap 2-phytyl-1,4-naphtoquinone methyltransferase [menG]. 32 257 IPR032904 GO:0042372|GO:0052624
Arst5g01813 257 NCBIfam ubiquinone/menaquinone biosynthesis methyltransferase 35 256 IPR004033 GO:0008168
Arst5g01813 257 ProSitePatterns ubiE/COQ5 methyltransferase family signature 1. 44 59 IPR023576 GO:0008168
Arst5g01813 257 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 22 248 IPR029063 -
Arst5g01813 257 Hamap Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 24 257 IPR004033 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g01813 Arst-Chr5 22164229 22167479 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g01813 70 194 Acyl Lipid Metabolism Gene Families AT3G18000 26.400 7.27e-08 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g01813 K23095 - gmx:100789470 395.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g01813 5 22164229 22167479 Arst5g01813 5 22164229 22167479 ECH