Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g01807 ATGAAGAGGAACAGAAGCTTCTGTCAACTATTTTTGCTCTCCTTTTTGGTGATTGTGATAACTATTATCACCTTCTCTATAATCTCAGTAGAAGCAAGGAAGAACAATCATCGCCAAAACATGATTAACAAAAGACTCCCCAAACGTCACACAAGAGGGAGAGCCACATCACCATCGCCATCTCCGTCGCCGTCTCCACCAATGTCCACCAACACTTTTGACATTATGTCCTTTGGGGCAAAGGGCAATGGAATTTCTGATGATTCACAGGCACTTGTAGTTGCATGGAGAAGTGCATGCAAAGTTGGTGGTGCTACAGTTTTAGTTCCATCTAAACTCAAATTCTTTCTCAAACCCCTCACTTTACAAGGCCCTTGTATGCCAGATCTCACTCTTCAGATTGATGGAACTCTAGTGGCTCCAGAAGAGGCATCTTCATGGCCAAAATCAAGTTTATATCAGTGGATAAATTTCAAATGGCTACAGAACTTCACACTCAAAGGATCTGGAACTCTTGATGGCCAAGGCTCTAATTGGTGGACTACTTCCTCCTCTTCAGAACCTTATAATTATGAGACCCAGAAGAGCTACTCTAAACACATTCCATACATGAAGCCAACTGCTGTGAGATTCTATTCTAGCAACCATATAACAGTTCGTGATATCAGAATCATAAACAGTCCCTTATGCCATCTAAAATTTGATAACTCAAAGGGGATTCAAGTTTCCAACATTACAATTTCTTCCCCACAGAATAGCCCTAACACTGATGGAATTCACTTGCAGAACACACACGATGTGCAAATTCAGCACTCTGATATTCAAACTGGAGATGACTGTGTATCCATCCAAACCGGTTGCTCTAAGGTTCATGTCCACCATATTATGTGTGGCCCCGGCCATGGTATAAGTGTCATTTTAACATCTCACAGGGGAGGGGAGTGGAATTTTCCTTTTTTATTGTGTTTTCTATCTGACATCATAGTTGAGGATATCTCAATGAAAAATACTCTATATGGAGCAAGGATCAAAACATGGCAGGGTGGGAATGGTATGGTTAAAAATGTGAGATTCTCAAGAATCCAAGTGTATGATGTTATGTATCCAATAATGATAGACCAATACTATTGTGACAAGCATGCGTGTAAGAACGAAACAGAAGCAGTGGTGATTTCAGGTGTTAAGTTCAAGCAAATAAGTGGGACTTATGGGGTGCAACCTATCCATCTAGCGTGCAGCAACTCCTTACCATGCACCGACGTTGACTTAATTGACATTCAACTTAGATCCTCTATTAAGTACCAAGGTTTATTACAGCAAGCTGTGTGTTGGAACTCTTATGGAACTTCTCAAGGACCTTTGCTACCTTCAAGCATTCATTATTGCTTAAGAAGTGGTGGTGGATCAATCAAGAGGATAGCAAGGTCACATGAGACTTTATGTTACTAA 1449 0.4079 MKRNRSFCQLFLLSFLVIVITIITFSIISVEARKNNHRQNMINKRLPKRHTRGRATSPSPSPSPSPPMSTNTFDIMSFGAKGNGISDDSQALVVAWRSACKVGGATVLVPSKLKFFLKPLTLQGPCMPDLTLQIDGTLVAPEEASSWPKSSLYQWINFKWLQNFTLKGSGTLDGQGSNWWTTSSSSEPYNYETQKSYSKHIPYMKPTAVRFYSSNHITVRDIRIINSPLCHLKFDNSKGIQVSNITISSPQNSPNTDGIHLQNTHDVQIQHSDIQTGDDCVSIQTGCSKVHVHHIMCGPGHGISVILTSHRGGEWNFPFLLCFLSDIIVEDISMKNTLYGARIKTWQGGNGMVKNVRFSRIQVYDVMYPIMIDQYYCDKHACKNETEAVVISGVKFKQISGTYGVQPIHLACSNSLPCTDVDLIDIQLRSSIKYQGLLQQAVCWNSYGTSQGPLLPSSIHYCLRSGGGSIKRIARSHETLCY 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g01807 482 MobiDBLite consensus disorder prediction 39 70 - -
Arst5g01807 482 SUPERFAMILY Pectin lyase-like 62 460 IPR011050 -
Arst5g01807 482 PANTHER - 70 449 - -
Arst5g01807 482 Gene3D - 57 462 IPR012334 -
Arst5g01807 482 Pfam Glycosyl hydrolases family 28 105 432 IPR000743 GO:0004650|GO:0005975
Arst5g01807 482 SMART pbh1 324 345 IPR006626 -
Arst5g01807 482 SMART pbh1 353 374 IPR006626 -
Arst5g01807 482 SMART pbh1 237 263 IPR006626 -
Arst5g01807 482 SMART pbh1 264 285 IPR006626 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g01807 Arst-Chr5 22108318 22112760 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g01807 1 481 Glycoside Hydrolase AT3G26610 56.531 0.0 549
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g01807 K01213 - gmx:100803027 686.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g01807 5 22108318 22112760 Arst5g01807 5 22108318 22112760 ECH