Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g01750 ATGGACTCGCGTCTCTCCAATTCCTCTTCTTCCAATCATCACTCTAATTCTAAGAAAAGGAAGAAGAATGCCACCGCCAACAACGCCAACCAGAAAACCCTAGGCGTCGCTTGGGGCTCAAAGTCCCTCTCTGCCTCCTGCTCCTCTCGAAAATCCCCGTTCTCTGATTTCAGCAGTTACATGGCACACAAGAATTGCAAACTTCAGAACCAGTTCGACTCCGAAGCTTCCGCATCTGCTGCTCGGAATACAATTTTCAGTGGAGTTTCTATATTTGTTGATGGTTTCACGGTCCCTTCCAGCCAGGAGCTGCGGGGCTACATGTTAAAGTATGGTGGAAGGTTCGAGAATTATTTCTCAAGACATTGTGTCACACATATCATCTGCAGCAATCTTCCTGACAGTAAAGTTAAGAACATCAGAGCCTTCAGTGCAGGACTGCCAGTAGTAAAACCCACTTGGATTTTAGATTCAATTGCTGCTAACAGACTCTTAAGCTGGGTGCCTTATCAACTTGAGCAGGTTGCTAGTAACCAACCAAAACTGTCAGCATTCTTCACATTGAAAAGTAGCAAGATGTCAGAGGACACTTCTACAAATGCCCTTTGTCAAGTGGAACCAGACGTTGAAGATTCATTCCCAAGGGTTGGCCAACTGAAGGAGAGACACCCATCTGAAGCTGGGGAGATGGTTGAAGTTTGCAGGCAAATCAGTAATGAATCAAATGATATTTCCTCCAAGAAAACTGATGTATTTATGATGGAAGAGCCTATCAGTGAAAGAGTTATATGTGATGAAGAAAAGCTTGCAGAAGCAAACAGTTCAGAAACTAATAATGAAAGAAACACTGAAGGGGAGCTTGATCCTACTTATCAAGAACCTTCTACATCAGTTAGTATTCCCTGCTCAGATAACCAGAATGTACATCAATTTCCAAGTTCTGAAGCCACTGGATCCTCTAAACAATGTCATTCAACTCTTACAGACCCTAATTTTGTAGAAAATTATTTCAAGAATTCACGACTTCACTTTATAGGAACCTGGAGACAACGCTATCGAAAACGGTTCCCAACGTTGTCTACTGGTCTGAATAATGGAATTTCTAACAGTAATAAATCCGATATTAATTCGGTTATTCTTCATGTTGACATGGACTGCTTTTTCGTTTCTGTGGTTATCAGAGACAAACCTGCGTTGTTGGACAAGCCTGTAGCTGTATGTCACTCAAATAATTCGAAGGGAACATCTGAGATTTCCTCTGCAAATTACCCAGCTCGTAGTTATGGTATCAGAGCTGGTATGTTTGTTCGAGATGCCAAGGCTCTTTGTCCCCATCTTGTTACCTTTCCATACAACTTTGAAGCTTATGAGGAAGCTGTAAGCTGTGATGAAGCATTTTTGGACTTCACAGATGCTATGGTTGAAGATCCTGAACTTTTGGCTTCATCAATTAGAAAAGAGATCTATGAAACCACTAGGTGTACAGCAAGTGCTGGTATAGGGGGGAATATGCTTATGGCTCGTATTGCTACTAGGACTGCAAAACCAAATGGTCAATGTTACATAACTCCAGAGAGAGTTGATGATCATTTAAATCAACTTCCAGTTGATGCTCTTCCTGGTATAGGGTATGTTTTACAAGAGAAATTAAAGAAGCAGAGTGTTCATACTTGTGGACAGTTGCGAATGATTTCCAAGAACTCACTGCAGAAGGAATATGGAATGAAAACAGGGGAAATGCTGTGGAATTATAGCAGAGGAATTGATTATCGATCAGTAGGGATCATTCAGGAATGTAAGTCTATCGGTGCGGATGTTAATTGGGGTGTGAGGTTCAGAGATATGAAAGATTGTGAACACTTCCTAATAAACCTATGCAAGGAAGTTTCGTTGCGTTTGCAATGTTGTGGAGTACAGGGGCGCACTTTCACTCTAAAGATAAAAAAGAGAAGAAAAGATGCTGATGAACCTGCAAAGTTTATGGGCTGTGGGGACTGTGAAAACTTGACTCACTCTGTAACGATTCCTCTTGCAACTGAAAATGTGGAAATACTTCAACGAATAGTAAAGCAACTTCTTGGATGCTTTTACATAGATGTTAAAGAGATTCGCGGTATTGGATTGCATGTTTCCAGACTTGAAAATGCAGATACGTCTAAGCAAGGTACAGAGAAGTATACTTTGAAATCATGGCTTACTTCAGGATCTGCAAGTGTGAAAAAACAGAAATATCATATGGGTCATAACAAACACAATTCAGATTGTGCGAATTGTGCTTCAAGTCATGGATGCATTCATTCACAAGGCTCTTCATTTCAAATTGACAATAAAATACTAAATATCCATGTTAGTGGTGATCCGATTTCAACACCACCTCCTTTATGTCAGCTTGATGTGGAAGTTATTAGAAATCTTCCCTCTGAAGTATTTTCAGAACTAAATGAAATTTATGGAGGGAAGTTAATTGATTTTATTGCTAAAGGAAAAGGCAAATGTGAGAGTTCTAGCTCTCTAGGAAACTCATTGGAGGACGATGCAGCTATATGTAAAGAAGAGGACCTTCCATATTCTGATCCTATTCCTCTAAATCAAATCTTTTCAGAAAATAAGGCAATGCAGCATGAAAGAGTACTTGGCTCAGGACATGGATCCTGTTCCCAAGTTACTCATAATTCGAACATTGAAAGAGATGATTTATTGCCTTCTTCTTTAAGCCAAATTGATGCTTCAGTGTTACAGCAAATTCCTGAGGATTTGAAAGCTGTTATTCTTGAGCATCTTCCTGCACACAGGGCGCAAGCTTTCTGCTCTACTCCTGCCATTTGCCCTGGTAGAATCAATCAGGATTCAGTAGGTGTTGATACTTCAAAGAATTGTCCTGGAACAGTTAATCATGCTTTGAATGACAGTCTTCGGGCCGGTAATCTTCCAAGTTGGATGGACAAGTTTAAAGACAGCAGTTGCTTAAGGAAGCTCAGAGAAATCTATCATAGATCTGGGTTTAATAGCCAGTTATCTTCAGTTTTACCCCAATTTTTATCTGAGTTTCACCACCTAGATCTTACCCAAGAGATTTACGATGAAACTGTTAACATCATGTGTGAGCTACTGAAGCAATATGTCAAAGTGAAGATAGAGAGAGATATTGAAGAGATTTATATTTGTTTTCGGCTTCTGAAAAGGTTTGCAGTGAAATCCCAATTTTTCTCCCGTGTATATAATGATATATTTCCATTCCTTCAGGCAGCCGTAGATGACAATTACGGAGGAAGCTTGTTTATGCCATAA 3288 0.4002 MDSRLSNSSSSNHHSNSKKRKKNATANNANQKTLGVAWGSKSLSASCSSRKSPFSDFSSYMAHKNCKLQNQFDSEASASAARNTIFSGVSIFVDGFTVPSSQELRGYMLKYGGRFENYFSRHCVTHIICSNLPDSKVKNIRAFSAGLPVVKPTWILDSIAANRLLSWVPYQLEQVASNQPKLSAFFTLKSSKMSEDTSTNALCQVEPDVEDSFPRVGQLKERHPSEAGEMVEVCRQISNESNDISSKKTDVFMMEEPISERVICDEEKLAEANSSETNNERNTEGELDPTYQEPSTSVSIPCSDNQNVHQFPSSEATGSSKQCHSTLTDPNFVENYFKNSRLHFIGTWRQRYRKRFPTLSTGLNNGISNSNKSDINSVILHVDMDCFFVSVVIRDKPALLDKPVAVCHSNNSKGTSEISSANYPARSYGIRAGMFVRDAKALCPHLVTFPYNFEAYEEAVSCDEAFLDFTDAMVEDPELLASSIRKEIYETTRCTASAGIGGNMLMARIATRTAKPNGQCYITPERVDDHLNQLPVDALPGIGYVLQEKLKKQSVHTCGQLRMISKNSLQKEYGMKTGEMLWNYSRGIDYRSVGIIQECKSIGADVNWGVRFRDMKDCEHFLINLCKEVSLRLQCCGVQGRTFTLKIKKRRKDADEPAKFMGCGDCENLTHSVTIPLATENVEILQRIVKQLLGCFYIDVKEIRGIGLHVSRLENADTSKQGTEKYTLKSWLTSGSASVKKQKYHMGHNKHNSDCANCASSHGCIHSQGSSFQIDNKILNIHVSGDPISTPPPLCQLDVEVIRNLPSEVFSELNEIYGGKLIDFIAKGKGKCESSSSLGNSLEDDAAICKEEDLPYSDPIPLNQIFSENKAMQHERVLGSGHGSCSQVTHNSNIERDDLLPSSLSQIDASVLQQIPEDLKAVILEHLPAHRAQAFCSTPAICPGRINQDSVGVDTSKNCPGTVNHALNDSLRAGNLPSWMDKFKDSSCLRKLREIYHRSGFNSQLSSVLPQFLSEFHHLDLTQEIYDETVNIMCELLKQYVKVKIERDIEEIYICFRLLKRFAVKSQFFSRVYNDIFPFLQAAVDDNYGGSLFMP 1095
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g01750 1095 SUPERFAMILY BRCT domain 60 172 IPR036420 -
Arst5g01750 1095 SMART BRCT_7 83 162 IPR001357 -
Arst5g01750 1095 FunFam DNA repair protein REV1 599 720 - -
Arst5g01750 1095 MobiDBLite consensus disorder prediction 270 324 - -
Arst5g01750 1095 Gene3D BRCT domain 75 172 IPR036420 -
Arst5g01750 1095 PIRSF REV1 4 940 IPR012112 GO:0003684|GO:0006281|GO:0016779|GO:0042276
Arst5g01750 1095 FunFam DNA repair protein REV1 78 173 - -
Arst5g01750 1095 CDD PolY_Rev1 332 713 - -
Arst5g01750 1095 Gene3D - 396 450 - -
Arst5g01750 1095 FunFam DNA repair protein REV1 396 450 - -
Arst5g01750 1095 ProSiteProfiles BRCT domain profile. 81 172 IPR001357 -
Arst5g01750 1095 Pfam BRCT domain, a BRCA1 C-terminus domain 83 170 IPR001357 -
Arst5g01750 1095 Gene3D - 598 722 IPR036775 GO:0003684|GO:0006281
Arst5g01750 1095 PANTHER DNA REPAIR PROTEIN REV1 8 1092 - -
Arst5g01750 1095 PANTHER DNA REPAIR PROTEIN REV1 8 1092 - -
Arst5g01750 1095 Pfam impB/mucB/samB family 382 511 IPR001126 GO:0006281
Arst5g01750 1095 Gene3D - 534 588 - -
Arst5g01750 1095 SUPERFAMILY DNA/RNA polymerases 371 593 IPR043502 -
Arst5g01750 1095 ProSiteProfiles UmuC domain profile. 379 543 IPR001126 GO:0006281
Arst5g01750 1095 Pfam impB/mucB/samB family C-terminal domain 600 720 IPR017961 GO:0003684|GO:0006281
Arst5g01750 1095 CDD BRCT_Rev1 85 172 - -
Arst5g01750 1095 MobiDBLite consensus disorder prediction 288 324 - -
Arst5g01750 1095 SUPERFAMILY Lesion bypass DNA polymerase (Y-family), little finger domain 598 711 IPR036775 GO:0003684|GO:0006281
Arst5g01750 1095 Gene3D - 379 524 IPR043128 -
Arst5g01750 1095 MobiDBLite consensus disorder prediction 1 30 - -
Arst5g01750 1095 Gene3D - 330 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g01750 Arst-Chr5 20777297 20789691 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g01750 K03515 - gmx:100778409 1471.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g01750 5 20777297 20789691 Arst5g01750 5 20777297 20789691 ECH