Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g01734 ATGGCTTCCTCCTCTTCTTCTCGATCGGATCAGGAGCGTCCAGGTTTAGGTTTAGGGTTATGTGAAGGAGAAGAAGAGTACGGATCAGAATCGGGTTGGGTGGAAGCTCGAAGTTCATGCGATCATCTGTGTTCCCTCTCCCCTGATCTCAGCCATATTCCAGCCCCTCAGAATACTCCCTGCTACGAGTGCCAACACCCGTCTGAAAACTGGTTGTGTCTATCGTGTAAGGAGGTGCTGTGCAGCCGTTTTGTGAACAAACACATGCTGTCCCACTCGCGGCGCACCAACCACTGTGTGGCACTCAGCTTCAGTGATCTATCAGTCTGGTGTTTCTCCTGTGACGCTTACTTGGATGCACAACTCATCCCACAGCTACGCCCCGTTTATCAACTTGCCTATATCTTGAAATTTGGCCAACCTCCGCCACTTCCTCAACACAATTAA 447 0.5056 MASSSSSRSDQERPGLGLGLCEGEEEYGSESGWVEARSSCDHLCSLSPDLSHIPAPQNTPCYECQHPSENWLCLSCKEVLCSRFVNKHMLSHSRRTNHCVALSFSDLSVWCFSCDAYLDAQLIPQLRPVYQLAYILKFGQPPPLPQHN 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g01734 148 SMART Zf_UBP_1 60 109 IPR001607 GO:0008270
Arst5g01734 148 ProSiteProfiles Zinc finger UBP-type profile. 38 139 IPR001607 GO:0008270
Arst5g01734 148 Pfam Zn-finger in ubiquitin-hydrolases and other protein 61 119 IPR001607 GO:0008270
Arst5g01734 148 SUPERFAMILY RING/U-box 38 131 - -
Arst5g01734 148 PANTHER HISTONE DEACETYLASE-LIKE PROTEIN 1 146 - -
Arst5g01734 148 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 34 140 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g01734 Arst-Chr5 20626565 20627366 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g01734 - - aprc:113869857 224.557
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g01734 5 20626565 20627366 Arst5g01734 5 20626565 20627366 ECH