Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g01732 ATGGGAATTCGGTCGGTGTTCGATGCGGGTGAGATGCGAAGAGAATTGGAGAAATGCGGTGTTGATCCTGACAAGTTCCTTCCTCTTGTTTGGAAGCACGTCATCCTCAAATCTAATCACCACTCCGATTGGGACTGGCAGAACCACGCCCCTTCTCTCCCCTCCCCGGCTTACTCTCTTCTCCGCTCCATCCCCCCTCTCTCTTCCTCCCTCCACTCCGTCTTCCACTCCAACGATAACGTCACCTCCAAGCTCCTCATCAAGCTCCATAATGGCGCTTTTGTAGAGGCTGTGATCATGAGGTATGACACTCGTTTGGGCAAATACGCCGGTAAACCCCGTCCCGGTGGTCTACGAGCAACTTTGTGCATATCATCTCAGGTTGGTTGTAAAATGGGTTGCAAGTTCTGTGCAACTGGAACCATGGGATTCAAAAGTAGCTTAACATCTGGAGAAATAGTCGAGCAATTGGTCCACGCCTCTAGGTTTTCACAAATCCGTAATGTTGTCTTCATGGGAATGGGAGAGCCTCTAAACAACTATTCTGCTGTGGTAGAATCCATTCGTGTCATGACTGGATTGCCGTTTCAATTGTCATTGAAAAGGATTACTGTCTCAACGGTTGGCATCATTCATGCTATCAACAAACTTCATAATGATCTGCCTGGTTTGAACTTGGCAGTCTCACTGCACGCACCAGCACAAGACATCAGATGCCAGATCATGCCTGCTGCTCGTGCTTTTCCTTTGCAAAAGCTGATGGCTTCACTGCAAGAATATCAAAGAAACAGTCAGCAGAAGATATTGATCGAGTACATAATGCTTGATGGGGTCAATGATGAAGAGCAGCATGCCCACCAATTGGGAAAACTGCTAGAAACATTTCAAGTGGTGGTGAACTTAATACCTTTCAACTCTATTGGTATGTTGAGTCAATTCAAACCAACTACTGAGCAGAAAGTTTCAGCATTTCAGAAAATTCTTAGAGGTACGTACAATATCCGAACAACAATTCGGAAGCAGATGGGTCAGGACATAAGTGGTGCATGTGGACAATTGGTGGTTAATGTACCCGATAAGTCTCTCGGAAATGCCGAACCACTAACAGACATAGAAGATCTTTTCATTTGA 1131 0.458 MGIRSVFDAGEMRRELEKCGVDPDKFLPLVWKHVILKSNHHSDWDWQNHAPSLPSPAYSLLRSIPPLSSSLHSVFHSNDNVTSKLLIKLHNGAFVEAVIMRYDTRLGKYAGKPRPGGLRATLCISSQVGCKMGCKFCATGTMGFKSSLTSGEIVEQLVHASRFSQIRNVVFMGMGEPLNNYSAVVESIRVMTGLPFQLSLKRITVSTVGIIHAINKLHNDLPGLNLAVSLHAPAQDIRCQIMPAARAFPLQKLMASLQEYQRNSQQKILIEYIMLDGVNDEEQHAHQLGKLLETFQVVVNLIPFNSIGMLSQFKPTTEQKVSAFQKILRGTYNIRTTIRKQMGQDISGACGQLVVNVPDKSLGNAEPLTDIEDLFI 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g01732 376 Pfam Radical SAM superfamily 125 283 IPR007197 GO:0003824|GO:0051536
Arst5g01732 376 CDD Radical_SAM 129 321 - -
Arst5g01732 376 FunFam 23S rRNA methyltransferase 69 360 - -
Arst5g01732 376 ProSiteProfiles Radical SAM core domain profile. 116 345 IPR007197 GO:0003824|GO:0051536
Arst5g01732 376 Pfam 4Fe-4S single cluster domain 129 213 - -
Arst5g01732 376 PANTHER 23S RRNA METHYLTRANSFERASE 7 360 IPR040072 -
Arst5g01732 376 Gene3D Aldolase class I 70 361 IPR013785 -
Arst5g01732 376 SFLD adenosine C2 methyltransferase (RlmN-like) 75 360 IPR004383 GO:0006364|GO:0008173
Arst5g01732 376 SFLD adenosine C2 methyltransferase (RlmN-like) 75 360 IPR004383 GO:0006364|GO:0008173
Arst5g01732 376 SFLD Radical SAM 75 360 IPR007197 GO:0003824|GO:0051536
Arst5g01732 376 SUPERFAMILY Radical SAM enzymes 121 295 - -
Arst5g01732 376 SFLD Radical SAM 75 360 IPR007197 GO:0003824|GO:0051536
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g01732 - - tpra:123909522 614.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g01732 5 20583422 20585894 Arst5g01732 5 20583422 20585894 ECH