Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g01731 ATGGCGACGGCGACGGAGGGAACCGAAACCAACGACGACGGTGCTCGTCCATGGCAATCCTACCACACTGTTTATACAACTGCCAAAGCAGGAATGGATGGTGTGGACAAGGAGAAAGTACAAAGGACAGTGTATGAAATGAGCAAAGGATCTAAGTATTTTCAGAACGAGGAACGCAAGGACGCTTTTATTACCCAGAAGATCGACAAACTCCGAACTCAATGTGATAAGCTTACCCAAGCAGACCTATCCCATTTTCAGAAGGTAGCTGACCGAAGAATACTTGAGCTAGAAGCTTTGCGGGATCTTTCAAGGATTTGGTTACATGTAGATATGGATGCTTTCTATGCAGCGGTTGAGACTTTAAGTAACCCTACATTAAAGGGCAAGCCAATGGCTGTTGGTAGCATGTCTATGATATCCACTGCCAATTATGAGGCTAGGAAATTTGGGGTTCGTGCTGCTATGCCTGGGTTCATTGCACGTAAACTTTGTCCAGAATTAATATTTGTCCCCACAGATTTCAAGAAGTATACCCATTACAGTGATTTGACCAGAACAGTTTTTCGGAGGTATGATCCCAATTTTATGGCTGCTAGCCTTGATGAAGCATACCTTGATATAACTGAAGTATGCAAAAGAAGGAACATCAAAAGTGAAGAAATTGCGGAAGAACTCCGCACTAGTGTTTATGAAGAGACCGGTCTCACATGTAGTGCAGGAGTGGCACCAAATCGCCTACTTGCCAAGGTTTGCTCAGATATTAACAAGCCAAATGGACAGTATGTCTTACCAAATGATCGTATGGCTGTTATGACCTTCATATCCTCCCTTCCTATCAGAAAGATTGGGGGCATTGGTAAGGTCACTGAACATATTCTGAAGGCTGTATTTGGAATTAACACGTGTGAACAGATGCTGGAGAAGGCTAGCTACCTCTGTGCTCTTTTCTCTCAGTCAACAGCAGTTAGACTGGAGTTTGTGCATGAAGTTCTGTTGTATAAAAAATTAGCGGAGCTTGCTGAAATACTGTCCACAGACATGCAAAAAGAGGGTCTCTGTGGGCGAACGTTGACTCTTAAACTGAAAACTTCTTCCTTCGAGGTTCGGACTAGAGCCATGACTTTACGAAAGTACATAAGCTCGAGGGAGGATATCTTGAAGCATGCTTCGGAGCTTCTAAAAGCAGAACTTCCTCTTTCAGTAAGATTGATAGGCCTTAGGATGTCACATTTTGATGGAGACAAGTATGGTGGCTCAACATCTAATCCTAAACAAAAGACTATCACCGACTTCATTGCTTCTGTAGATGCCGATAGGAACCATTTTTTGCCAGATGTTGCAGATCATGATTTTGTCAGCCATACAGAGACTAATGTTTCCATTGGCAGTTGCCAAACAAGCAGAGATTCTGCTGATGGGAATCATTCATCTGATGTAAACTGCCAAAGTGGCACTGGCTGGAGTTCAGAGGAGATACAAACATCTGGCAACAATGCTTCATGTTCTAACTATGGCCAAGTTAAAGAAGCGGTGGAATCAACTTTTCCAATTCAGGGACAGTTTGAAGACACTAGTACACTAAATTTGTCTAATCTCCTGGACGATGAGCGACTTAGTTCTTGCGAGGATAAGACAATGTTGTGGTTGAATGACTACAAATGTTCACTTTGTGGAATAGAACTGCCTCCTAGTTTTGTTGAGGAAAGATTAGAGCACTCTGATTTTCATCTTGCCGAAAAGCTTCAAAAGGAAGAATCTCGGATTCACCAAAGAACATCTGTTTCAAGTCGAAGCTGGGATCAGAAGAACAGAATCACTAGAGAAAGCATATCCAAGAAGCAAAAGTTGTCTCAGAAAGAAGGCAGTTACAGACCCATTGATTATTTCTTTTTGTTAAAGAGCAATAAAAACCGTCCCAGTTAG 1926 0.4237 MATATEGTETNDDGARPWQSYHTVYTTAKAGMDGVDKEKVQRTVYEMSKGSKYFQNEERKDAFITQKIDKLRTQCDKLTQADLSHFQKVADRRILELEALRDLSRIWLHVDMDAFYAAVETLSNPTLKGKPMAVGSMSMISTANYEARKFGVRAAMPGFIARKLCPELIFVPTDFKKYTHYSDLTRTVFRRYDPNFMAASLDEAYLDITEVCKRRNIKSEEIAEELRTSVYEETGLTCSAGVAPNRLLAKVCSDINKPNGQYVLPNDRMAVMTFISSLPIRKIGGIGKVTEHILKAVFGINTCEQMLEKASYLCALFSQSTAVRLEFVHEVLLYKKLAELAEILSTDMQKEGLCGRTLTLKLKTSSFEVRTRAMTLRKYISSREDILKHASELLKAELPLSVRLIGLRMSHFDGDKYGGSTSNPKQKTITDFIASVDADRNHFLPDVADHDFVSHTETNVSIGSCQTSRDSADGNHSSDVNCQSGTGWSSEEIQTSGNNASCSNYGQVKEAVESTFPIQGQFEDTSTLNLSNLLDDERLSSCEDKTMLWLNDYKCSLCGIELPPSFVEERLEHSDFHLAEKLQKEESRIHQRTSVSSRSWDQKNRITRESISKKQKLSQKEGSYRPIDYFFLLKSNKNRPS 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g01731 641 Pfam Ubiquitin-Binding Zinc Finger 552 585 IPR041298 -
Arst5g01731 641 Pfam IMS family HHH motif 270 300 IPR024728 -
Arst5g01731 641 ProSiteProfiles Zinc finger UBZ3-type profile. 548 585 IPR041298 -
Arst5g01731 641 FunFam DNA polymerase IV 324 418 - -
Arst5g01731 641 FunFam Polymerase (DNA directed) kappa 117 169 - -
Arst5g01731 641 CDD PolY_Pol_IV_kappa 108 412 IPR022880 GO:0003887
Arst5g01731 641 Gene3D - 170 218 IPR043128 -
Arst5g01731 641 MobiDBLite consensus disorder prediction 593 620 - -
Arst5g01731 641 SUPERFAMILY DNA/RNA polymerases 81 325 IPR043502 -
Arst5g01731 641 PANTHER DNA REPAIR POLYMERASE UMUC / TRANSFERASE FAMILY MEMBER 18 323 - -
Arst5g01731 641 FunFam DNA polymerase kappa subunit 167 262 - -
Arst5g01731 641 Gene3D - 274 323 - -
Arst5g01731 641 Gene3D - 25 114 - -
Arst5g01731 641 MobiDBLite consensus disorder prediction 602 620 - -
Arst5g01731 641 Gene3D - 324 421 IPR036775 GO:0003684|GO:0006281
Arst5g01731 641 MobiDBLite consensus disorder prediction 464 490 - -
Arst5g01731 641 SUPERFAMILY Lesion bypass DNA polymerase (Y-family), little finger domain 326 410 IPR036775 GO:0003684|GO:0006281
Arst5g01731 641 ProSiteProfiles UmuC domain profile. 107 287 IPR001126 GO:0006281
Arst5g01731 641 Pfam impB/mucB/samB family C-terminal domain 333 415 IPR017961 GO:0003684|GO:0006281
Arst5g01731 641 Gene3D - 219 273 IPR043128 -
Arst5g01731 641 FunFam DNA polymerase kappa subunit 24 114 - -
Arst5g01731 641 Gene3D - 115 169 - -
Arst5g01731 641 Pfam impB/mucB/samB family 110 254 IPR001126 GO:0006281
Arst5g01731 641 PIRSF DNA_pol_eta 19 86 - -
Arst5g01731 641 PIRSF DNA_pol_eta 355 635 - -
Arst5g01731 641 PIRSF DNA_pol_eta 100 222 - -
Arst5g01731 641 PIRSF DNA_pol_eta 217 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g01731 Arst-Chr5 20577883 20582183 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g01731 K03511 - gmx:100816973 922.539
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g01731 5 20577883 20582183 Arst5g01731 5 20577883 20582183 ECH