Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g01416 ATGGCGCAGAAGAGATTCATCGTTGAAGTTGAGAAAGCCAAGGAGGCCGAAGGAGAGAGGCCGTCAAGAGGTCCTGTTTATCGGAGCCTCTTCGCAAAGGATGGATTTCCTCCGCCTGTTCCCGGCCTCGATAACTGCTGGGATATTTTCCGAACTTCTGTCCAGAAATATCCGAAAAATCCAATGCTTGGTCACCGGGAAATCGTGGATGGGAAGCCCGGCAAGTACAAGTGGAAAACATATGAAGAAGTATATGATCTGGTGATAAAGATTGGGAATTCCCTCCGCAGCTGTGGCTATGGGGAAGGTGTAAAATGTGGAATTTATGGTGCCAATTGTGCAGAGTGGATTATAAGCATGGAGGCCATCAATGCTCACGGACTTTATTGTGTTCCTTTGTATGATACCTTAGGTGCTGGCGCTGTAGAGTTTATTATATGCCATGCAGAGGTATCTGTATCATTTGTAGAAGAAAAGAAAATACCGGAGCTATTGAAGACATTTCCAAATACAACAAAGTATCTCAAGACGCTTGTGAGCTTTGGGAAGGTTACACCTGAACAAAAGCAAGAAGTTGAAAAGTTTGGGTTGGCAATATATTCGTGGGATGAATTTTTGCAAGTGGGTCAAAATCAAAGTTTTGATCTTCCTGTGAAGAAAAAGAGTGACATCTGTACAATAATGTACACTAGTGGAACTACTGGCGATCCCAAGGGTGTGTTGATATCTAATGAGAGTATCCTTACTCTCTTAGCTGGGGTTAAGCGACTGTTGGAGTCTGTCAAGGAGGAATTGAATGACAAAGATGTCTACTTGTCATACCTTCCTCTTGCACATATCTTTGATAGGGTCATTGAAGAGCTATTTATATGGCATGGTGCCTCCATTGGTTTCTGGCGTGGGGATGTCAAATTGTTAATTGAAGACATTGGGGAGCTAAAACCAACTATTTTCTGTGCTGTTCCACGTGTGCTTGATAGAGTGTACACAGGTTTGACACAAAAGGTTTCCGCTGGGGGCTTCCTGAAACAAGCATTATTCAACTTTGCTTACTCATATAAGTTGAACAACATGAAGAAAGGGAGAAAGCATGAAGAGGCATCTCCACTTCTTGACAAAATTGTGTTTGATAAGGTGAAGCAAGGGTTGGGGGGTCATGTACGCCTCATTTTGTCTGGAGCAGCACCTCTATCTCCACATGTGGAGAGTTACTTAAAAGTGGTTACTTGTGCTCATGTCATACAAGGATATGGTCTGACTGAAACCTGTGCGGGAACCTTTGTCTCACTACCACATGAAATGGATATGGTCGGGACAGTGGGGCCACCCGTACCGAATGTTGATGTGTGCCTGGAATCTGTTCCTGATATGGGATATGATGCCCTTGGAAGCACACCAAGAGGAGAAATTTGTGTTAGGGGAAATACCTTGTTTTCAGGGTACTACAAACGGGATGACCTCACTAATGAGGTTCTGACCGATGGATGGTTCCATACAG 1498 0.4393 MAQKRFIVEVEKAKEAEGERPSRGPVYRSLFAKDGFPPPVPGLDNCWDIFRTSVQKYPKNPMLGHREIVDGKPGKYKWKTYEEVYDLVIKIGNSLRSCGYGEGVKCGIYGANCAEWIISMEAINAHGLYCVPLYDTLGAGAVEFIICHAEVSVSFVEEKKIPELLKTFPNTTKYLKTLVSFGKVTPEQKQEVEKFGLAIYSWDEFLQVGQNQSFDLPVKKKSDICTIMYTSGTTGDPKGVLISNESILTLLAGVKRLLESVKEELNDKDVYLSYLPLAHIFDRVIEELFIWHGASIGFWRGDVKLLIEDIGELKPTIFCAVPRVLDRVYTGLTQKVSAGGFLKQALFNFAYSYKLNNMKKGRKHEEASPLLDKIVFDKVKQGLGGHVRLILSGAAPLSPHVESYLKVVTCAHVIQGYGLTETCAGTFVSLPHEMDMVGTVGPPVPNVDVCLESVPDMGYDALGSTPRGEICVRGNTLFSGYYKRDDLTNEVLTDGWFHTGDVGEWQPDGSMKIIDRKKNIFKLSQGEYVAVENLENVYRQLSCIDSIWVYGNSFESFLVAVANPSKPVLERWAEENGIKIDFDSLCKDSRAKSYILGELTRIAKENKLKGYEFIKDVHLDPVPFDMERDLITPTYKMKRPQLLKYYKNVIDDMYKSGGKRSA 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g01416 662 ProSitePatterns Putative AMP-binding domain signature. 227 238 IPR020845 -
Arst5g01416 662 Pfam AMP-binding enzyme 51 524 IPR000873 -
Arst5g01416 662 CDD LC-FACS_euk 74 655 IPR045311 GO:0004467|GO:0006631
Arst5g01416 662 SUPERFAMILY Acetyl-CoA synthetase-like 43 655 - -
Arst5g01416 662 Gene3D - 43 516 IPR042099 -
Arst5g01416 662 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 15 654 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g01416 Arst-Chr5 15626363 15632768 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g01416 3 656 Acyl Lipid Metabolism Gene Families AT4G23850 74.159 0.0 1048
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g01416 K01897 - gmx:100814965 1171.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g01416 5 15626363 15632768 Arst5g01416 5 15626363 15632768 ECH
Arst5g01416 5 15626363 15632768 Arst3g03526 3 93507235 93515757 PCT