Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g01373 ATGACAATGGTGGTGTATGGCGTATTAATGTTGTGGTGTGCAATAGTTGGGCTTGCCATGAGGCCCGGGGTGATGGAGGATCAGACGCCGCTAAGGTCGTCATCATCAGCAGCTAATAGTAGTAGTTATGACTACGCAGATGCTCTGGAAAAGGCTATCTTATTCCTTGAAGGACAACGTTCAGGACAGTTGCCGTCCAATCAAAGAGTCACCTGGAGAGCAGACTCAGCTCTCTCTGACGGCAAACTTCAAAATTTGGATTTGACCGGAGGATATTATGACGCTGGTGATAATGTGAAGTTTGGATGGCCAATGTCATTTACAGTGACGTTATTGAGTTGGGCAAATATTGAGTATCAGACTCAGAAACAGACTGATCAAAACCTCCAAAGTGCAATCCGCTGGGGCACTGATTTCATACTCAAAGCCCACACTTCGCCGACTACGCTCTTCACACAGATCGGAGATGGGAACGCCGATCACCAATGTTGGGAGCGCCCAGAGGACATGGATACTCCAAGAACACTCTACAAGATTGATTCTTCTTCCCCTGGAACCGAGGCTGCTGCTGAATCTGCTGCTGCTCTTGCTGCTGCCTCCATTGCCTTCAAGAAAACAGATCCCGCTTATTCATCAACCCTATTAACCCACTCTAAATCACTGTTAGATTTTGCTGACAAGTATAGAGGATCGTACTCGCTTTCTTGCCCATTCTACTGCTCCTACTCAGGTTACCAGGATGAACTGTTATGGGCGGCGTCTTGGCTATACAAGGCCACCGGAGAAAGCCAGTATTTGAACTATATTACTTCTAACCAAGGATGGAGTCATGCCGTAAATGAGTTCAGCTGGGATAACAAATTTATTGGAGCTCAAACAATACTCACCCAGGAATTTTATGAGGGGAAGAATGAACTGGGCAAGTTTAAGAGTGACGCTGAATCATTTGTATGCGCAGTGATGCCAGGAAGTAGCTCTCAACAGATTAAGACGACTCCCGGCGGTCTATTGTATACTAGAGACAGTAGCAACTTGCAATATACAACAAGCTCAACCATGGTGCTATTCATTTTCTCCAAAATCCTAAGCAGGAACAACGTCAGTGGAATCCAGTGTGGCTTTTCACATTTCACTGCCCCCCAAATTAGAGACTTTGCAAAAACACAGGTGGACTACATACTGGGAAAGAATCCAATGAGTATGTCGTACATGGTTGGATTTGGCAGTAACTACCCAAAGAAATTACACCACAGAGGCTCATCAATCCCTTCAATCAAAGATCAGCAGGGAAAAGTGGGGTGCAGCGATGGTATGTCAAACTATTACAATTCACCAAATCCAAATCCCAATACTCACGTTGGTGCCATTGTTGGAGGCCCTGATTCCAATGACCACTTCGGTGATGAAAGATCTGACTATTCTCACAGCGAACCTACAACCTATATTAATGCTGCTTTCGTCGGTTCCGTCGCTGCTTTGCTTGCTGAATGA 1491 0.4554 MTMVVYGVLMLWCAIVGLAMRPGVMEDQTPLRSSSSAANSSSYDYADALEKAILFLEGQRSGQLPSNQRVTWRADSALSDGKLQNLDLTGGYYDAGDNVKFGWPMSFTVTLLSWANIEYQTQKQTDQNLQSAIRWGTDFILKAHTSPTTLFTQIGDGNADHQCWERPEDMDTPRTLYKIDSSSPGTEAAAESAAALAAASIAFKKTDPAYSSTLLTHSKSLLDFADKYRGSYSLSCPFYCSYSGYQDELLWAASWLYKATGESQYLNYITSNQGWSHAVNEFSWDNKFIGAQTILTQEFYEGKNELGKFKSDAESFVCAVMPGSSSQQIKTTPGGLLYTRDSSNLQYTTSSTMVLFIFSKILSRNNVSGIQCGFSHFTAPQIRDFAKTQVDYILGKNPMSMSYMVGFGSNYPKKLHHRGSSIPSIKDQQGKVGCSDGMSNYYNSPNPNPNTHVGAIVGGPDSNDHFGDERSDYSHSEPTTYINAAFVGSVAALLAE 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g01373 496 SUPERFAMILY Six-hairpin glycosidases 42 495 IPR008928 GO:0005975
Arst5g01373 496 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 392 418 IPR018221 -
Arst5g01373 496 FunFam Endoglucanase 41 496 - -
Arst5g01373 496 Gene3D - 39 496 IPR012341 GO:0005975
Arst5g01373 496 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 3. 466 484 IPR033126 -
Arst5g01373 496 PANTHER ENDO-1,4-BETA-GLUCANASE 15 494 - -
Arst5g01373 496 Pfam Glycosyl hydrolase family 9 45 488 IPR001701 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g01373 Arst-Chr5 14718625 14721600 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g01373 44 495 Glycoside Hydrolase AT4G23560 70.330 0.0 651
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g01373 - - aip:107640241 899.427
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g01373 5 14718625 14721600 Arst5g01373 5 14718625 14721600 ECH