Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g01331 ATGAGGCAGGTGAAGGCGCTTCAACTGTTTCATGATTTGGTGAACAAGAATGAACCAGCTCGGTTGCTTGGTTTGGATGTCGGTGATAAATACGTTGGTCTTGCTCTTTCCGACTTCCAGAACAAGATTGCTTCACCCTTCAGTGTTCTGGTCAGGAAGAAATCAAATATTGATTTAATGGCTTCCGATTTCGAGACTCTAATCTCTAAATATTCATTGAAGGGCTTTGTTGTTGGCCTCCCTTTCAGCTGTCACCGTGTTTCGACTGATGCTGCACAAGTGAAGGTCTTAATTGATGCCCTTTCTAGAACTAAAAAACTTCAAGGTCTGAAATATACTTATTGGAACGAGTCTTTCACGTCAAAGAATGTTGAATTGCTCTTAAGGCCTTTGAACTTGAATAATGCAGTTCATTCCAAGACTATGCTCGACAAATTTGCTGCTGTAGGGATACTCCAGGGATACCTGGATTATGTTAACAGAAAAATGAAGTTAATGGAAACAGAATCTCTTTCTGCAGGTAGGCATGAGCCAGATATCCATTTAGAAAACTGTTGTTGTAAAGGTGTAAGCACCAAAGTGTAG 585 0.4051 MRQVKALQLFHDLVNKNEPARLLGLDVGDKYVGLALSDFQNKIASPFSVLVRKKSNIDLMASDFETLISKYSLKGFVVGLPFSCHRVSTDAAQVKVLIDALSRTKKLQGLKYTYWNESFTSKNVELLLRPLNLNNAVHSKTMLDKFAAVGILQGYLDYVNRKMKLMETESLSAGRHEPDIHLENCCCKGVSTKV 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g01331 194 Hamap Putative pre-16S rRNA nuclease [yqgF]. 20 160 IPR005227 GO:0006364
Arst5g01331 194 FunFam Putative pre-16S rRNA nuclease 19 167 - -
Arst5g01331 194 Pfam Holliday junction resolvase 21 157 IPR005227 GO:0006364
Arst5g01331 194 NCBIfam Holliday junction resolvase RuvX 23 157 IPR005227 GO:0006364
Arst5g01331 194 CDD YqgF 22 158 IPR005227 GO:0006364
Arst5g01331 194 SUPERFAMILY Ribonuclease H-like 21 160 IPR012337 -
Arst5g01331 194 SMART rnase_8s 20 124 IPR006641 GO:0006139
Arst5g01331 194 PANTHER POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN 1 169 IPR005227 GO:0006364
Arst5g01331 194 Gene3D - 19 167 IPR037027 GO:0006139
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g01331 Arst-Chr5 14250864 14253597 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g01331 - - aip:107643075 349.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g01331 5 14250864 14253597 Arst5g01331 5 14250864 14253597 ECH