Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g01312 ATGTCGCTGCAAGGAAAGCTGGACAGCTTCAAGAAGCAGCAGGCGAAGTGCCAGTCGACGCTGTCAAGCATCGCGGCGTCGAAGGCTGCCAATCAAAAACAGAAACAGAATCCTGCTCCGGCAGCAGCTTCTCCGGTGCCGGCAATTAAATTCTCAAATGACACAGAGAGGCTTCAACAGATCAACGGTATCCGCAAAGCCCCCGTTGGGGCTCAGATGAAGCGTGTCATTGAACTCCTCTATGAGACAAGGCAGGCTTTTACACCAGAACAGATAAATGAGGCTTGCTATGTGGATATGAGGGCAAACAAAGATGTTTTTGAGAATATGAGGAAAAACCCCAAAGTCAAATTTGATGGGGAACGATTCTCTTACAAGTCGAAGCATGATGTTAAGGACAAAAGTCAGTTGCTCTACCTGATTCGCAAGTTTCCGGAGGGCATTGCTGTTATTGACTTGAAGGATTCTTATCCAGCTGTGATGGAGGACTTGCAGGGTTTGAAAGCCGCAGGGCAGATTTGGCTGCTATCCAACTTTGATTCACAAGAAGACATTGCATATCCTAATGATCCCAGGGTACCCATTAAGGTTGATGATGACCTGAAACAGCTTTTTCGGGGGATTGAATTGCCTCGTGATATGCTTGACATAGAGAGGGATCTCCAAAAGAATGGAATGAAGCCTGCTACTAACACTGCAAAGAGGAGGAGTGCGGCGCAAATGCAAGGCATTACTCCCAAGGCCAAGCCCAAGGCTAAGAAGACCGAGATCAGCAAGAGGACTAAGCTCACCAATGCCCATCTTCCAGAGCTTTTCCAGAAATTGAAAGATTCCTGA 837 0.4731 MSLQGKLDSFKKQQAKCQSTLSSIAASKAANQKQKQNPAPAAASPVPAIKFSNDTERLQQINGIRKAPVGAQMKRVIELLYETRQAFTPEQINEACYVDMRANKDVFENMRKNPKVKFDGERFSYKSKHDVKDKSQLLYLIRKFPEGIAVIDLKDSYPAVMEDLQGLKAAGQIWLLSNFDSQEDIAYPNDPRVPIKVDDDLKQLFRGIELPRDMLDIERDLQKNGMKPATNTAKRRSAAQMQGITPKAKPKAKKTEISKRTKLTNAHLPELFQKLKDS 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g01312 278 Pfam TFIIE beta subunit core domain 71 131 IPR003166 GO:0006367
Arst5g01312 278 ProSiteProfiles TFIIE beta central core DNA-binding domain profile. 60 132 IPR003166 GO:0006367
Arst5g01312 278 Pfam TFA2 Winged helix domain 2 132 189 IPR040501 -
Arst5g01312 278 PIRSF TFIIE-beta 1 277 IPR016656 GO:0005673|GO:0006367
Arst5g01312 278 MobiDBLite consensus disorder prediction 249 263 - -
Arst5g01312 278 PANTHER TRANSCRIPTION INITIATION FACTOR IIE, BETA SUBUNIT 1 277 IPR016656 GO:0005673|GO:0006367
Arst5g01312 278 MobiDBLite consensus disorder prediction 227 263 - -
Arst5g01312 278 MobiDBLite consensus disorder prediction 26 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g01312 Arst-Chr5 14123737 14126282 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g01312 K03137 - cpap:110811575 419.853
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g01312 5 14123737 14126282 Arst3g03750 3 105606482 105608996 PCT